G230695


Basic Information

Item Value
gene id G230695
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 17934850 ~ 17938417 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU263799
TCCAAAAATTTTGCTCATTTAATTTCAAATTCTGTACATATTTTTACATAAATGGAAtgttataacatactgtatgtctaaaAAGTTTCTAAAATAACATTTCTAGGTATGTACTGTCGGCCTGTCTCTGAAGTACCTTGGGAGGTATAACCCAAATAAAAATAGTTTCCTTCACCTCTCAACTATTACATGAATGCCCTACTACACCTCCACCTTCATTCAAGCAAGCTCATCCCCAACTAATAATCATCTACAGTATGTTCGCTGTCATGGTATATTATAGTATCATGAACGGAACATCAACCTGATGACATATGTGTGTTCTCTAACATCTCACATTCATATATGTTGACTGTTTTAAACACTGCTTCTTCACAAGTCCATCCATATGGTGCTTTTCAACACGTAGATTTGGATAGACATCGATCCGATTGGATTGATATGGGCTCAAATTGGCAACTGTAGCATAAGCAGCAAAACCAAAACATTTACACAAAATGACCATATAACCCCCCTCCTTTACCACTGGCCTGACATCCAAACTGAATTCTCTACAGTAAAAACATAACGAAATCAGTTTAGGTGCTAGGCTGCCTCCCCACTCGCCCCCCAAAGAAACTCAAACATCCAAAATAAAAGACTAACAAAACTGAAATGGGGGTCAAATGTGATTTAAAACTGATTCTAGCTACAGTAGATCATATAAGGCTGTTCTGGTAGGCTAGCTAGGGAGGATCCTCGTGCTACACACATACCCATGACAATAAGGGCATATTGTACACATACAGTAGTATGCTTCAACAATCGTGAGCCATTCGACAGCATTTCAATAcacttacagtacagtagccATGGGACAAACCATGCGGTTAGACCAGACATTCTAGTTTCAGACCAGATATTCTAGTTTCTCCCTCACTGATGTGCAATGAGGATAAACTCCCATCTGGATTTAGATTAAACTTTATTAGCTATAGTACATGATGACAAATGGGGAAACAGTCCATTTGGGTGGGGGATTTTTATTGTCCCAATTCCAAAGTGCTTTATGCCTCACTGTAGTTCTTGAAAAATAAATTGTTAGCAGCATGTTATAAAGGCATGATGATGGCACTTTTGGAGAAACCACAGTTAATATGGTGTAACTGACCCAGTAGCCATGGTAACACTATCTTTAGTATATCCATACCATAACACCCAGATCCCCTATTAATGCTCTTTGTTAATTTGTCTGACTGGTTTGAATTGGGCAACCAATATAAATACTATTGATCTTATTCCTTGATATGTCATaataatatactataatctaAAATCCCTAAACTGTGGAGATGAAAAACTTCCACAATGATTGTGAAAAGCATAGCCAATAAAGCCTTTTGTCTATCAGTTTCTTACTCTGCCCTTATTCGCAACCCAATGGTGAAGATGGAGGTCTACTATACTTGTGTACTCGTTAGCAGCACATCCTGGGAAAGCTCTCAAAACATTAAAGAGAACAACAGCAAGGCCTTGTTTAAATATTACAACACAGGGTTGCTGGAAGCTGAAATGTATTAGATAGGAAATGTGCAAAACCTTCAAACACGTTGACAAAGTTTCAGGGGATCCAACATTCTAATGATAACTTTTTTGAAGACATCAGTCTTCCCCTTATTCTGATTGGCTTTGAAATGGAGCTCCACCAATCGTCTACTTCCTGCCCCGCCCTCTCACCTCTACTGTGATAGATTGAATGGTAGATGATTATGATTGGGTAAAAAGTGTGCTAGCTCAGGCAGCTATTTGAAACAGCACTGAAATGGACAAACATGAATAGAAGACATAGTTATTCATGTCATTCTCTTTGCATTAAGGCCCGACTTAGTTTCACTACaactcacacatacatacacagataTGCAATTACACCATTATGTCAAAACCTGCACACTTAAAATAAAATCATTTGCATAATAATAACTGCTAAGTCTCATGATGATAAATAAAGATTAAAAGtcaaagtgagtgagtgagagaagagGATGGGTGTGTGAACCCTGTAGAAGGCTAGAGTATATACACCACATAATGTCAACGGGCCCCTGGGGGAGGGGGATATCTGATCTGGGGTCAGCACATTGTAGCCTGGATCCCAACTGAAATGCTCCTCTTTACAATTGCCAAACTGAAGATGTACAGTAAAACACAGTGAAACACAGTAATTCAGTTGGGAATCAGGCTAAGCACAGAGGGCCTCATGTCCCAGTCAGACAGCTATTGCTGCTACAAAAACTAAGATTAACGTTCTCACTCCAGAGAAGTGCCTGCTGGGAGTTGTAGTTGCCACTAGCCGAGCCACACGCTTCTGGTAGCACAGTCCAGTTCACGTCTTGTTGCTACCACAGAGGCATTGAAGGGTTGTGAGTTAGATAGCTAGTCAGGGGAAAGGAGAGCGTGAGAAACAGAGGGTGGGACAGCATATAGCAGGGCACTTCTAATTTCAGTGTGGCTAGCAGCTAGCAGCATGTCCCAGTGGAGTAAAGGTTAGAGTTAAGCAGAGTTTCACATTCAGCTGAGTCTGGCTCTCTGCTgggtctctctccgtctgtcgtCATCCAGTCAACAACACACAGGGAGAAGGGCTAGGGAGGGAGGATTTAATATAGACAGATACCTGACCTCCTGCCCTCTGTCCCCCACCTACCATTcacactgttctgttgtcctgaCTCTGCCTTGGTAGGCCAGGATCCGAAGGTGAAGGCACTGGTAGACAGAGTTGGTGAGGATGGGgaaagagtgggagagggggatgagaactgacttccccctctcccctcagctTGCTCCCCGAAATGTCCAGGTGTACAATCACTCAGACCAAACAGATGGGAGGAGACCTGAATCTGCTGCCCAATAACACAGGAGGAGGGAATTCCAAGTCACAGTAGCCCTGGAGCTCAGCCAATCACAGCAGCACAATCACTGAGGCACGGCCAATGGGATGGAATGCAAAATGTCTGTGGGTGGCATATACAGCCGTTCCATTGATgcagcagagagtgagagggcgTGTTGAGAGCAACAGATTTTCCTGATTGGATAGTTGTGCAAAAGAGGTGGTGTCTTCCCTCAACATCAGGCTGTCGGATaagcatgctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctttgaggACAAAGCAGAGGTTGGTTGTATTTGTGAGTGTGCATTTGTGAgtttgtgtctgtctggtctTGTCTTGGAGCAAACTGTGTGTGTGAAGATAAAGAGATAGATCAGCATTAAATGTAGTTTCCCTGAAAATTGCTTTTAATGAGATTTGGCACACTGCGGTACTTGACTGGTTTGAGTGGAGGTGTTGAGGGCTGTTGAGACATACTGGAGGTGGTGGGGGTAGAGGggtagggtcaggggtcagttcTGTACTGGCCACAGAGTCACAGGGAAGGGGATGGGATTCACATTGAGGACTGTTGTTATTGGAACAGATCACTCTTCTTATCGAGGAAGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU263799 True 3528 lncRNA 0.55 2 17934850 17938417

Neighbor

gene id symbol gene type direction distance location
LOC110503762 LOC106605503 coding downstream 746503 17075513 ~ 17188347 (-)
LOC118946294 NA coding downstream 829468 17102465 ~ 17105382 (-)
cep162 cep162 coding downstream 1108740 16805002 ~ 16826110 (-)
LOC110512031 grik2 coding downstream 1512873 16187381 ~ 16421977 (-)
LOC118946082 NA coding downstream 1969405 15965041 ~ 15965445 (-)
LOC110511923 LOC106579390 coding upstream 2101 17940518 ~ 17947436 (-)
LOC110511898 LOC106579390 coding upstream 18831 17957248 ~ 17964878 (-)
LOC110511884 cg024 coding upstream 29592 17968009 ~ 17969851 (-)
LOC110505118 LOC106579600 coding upstream 36743 17975160 ~ 17985544 (-)
LOC110511860 LOC106579366 coding upstream 94926 18033343 ~ 18048841 (-)
G230689 NA non-coding downstream 17535 17916923 ~ 17917315 (-)
G230525 NA non-coding downstream 217416 17644653 ~ 17717434 (-)
G230523 NA non-coding downstream 306036 17627361 ~ 17628814 (-)
G230467 NA non-coding downstream 356382 17527782 ~ 17578468 (-)
G230442 NA non-coding downstream 455682 17478887 ~ 17479168 (-)
G230697 NA non-coding upstream 11012 17949429 ~ 17949656 (-)
G230700 NA non-coding upstream 13265 17951682 ~ 17952044 (-)
G230707 NA non-coding upstream 32010 17970427 ~ 17970665 (-)
G230710 NA non-coding upstream 34438 17972855 ~ 17973230 (-)
G229707 NA other downstream 886506 17043792 ~ 17048344 (-)
G229380 LOC106605502 other downstream 1084651 16849972 ~ 16850199 (-)
G229373 LOC100194703 other downstream 1095011 16839389 ~ 16839839 (-)
G228191 LOC106578455 other downstream 2143685 15762029 ~ 15791401 (-)
G228098 fbrl other downstream 2226585 15706234 ~ 15708265 (-)
LOC110503747 lars2 other upstream 155339 18093704 ~ 18154474 (-)
G231652 rn146 other upstream 661313 18599730 ~ 18601875 (-)
LOC110511176 LOC106579058 other upstream 1220883 19065512 ~ 19282368 (-)
rims2a LOC106579570 other upstream 1603685 19416054 ~ 19652601 (-)

Expression


Co-expression Network