XLOC_021940


Basic Information

Item Value
gene id XLOC_021940
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 40814743 ~ 40815221 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044899
ATATACACAGGTTCCTGCCCAAAACTTCTTGGAACTGGGACACCTTCCGGATCAACCAGATCCAATTCAGTTTCTGGCTCTGGAACACATGATTGCTCCATGTCGACCTCTTCCATTTCAGAAGCTGGTTTATAATCGCTTGCCTCTGAAACACTTATCATTTCAGCAACATCTGGGTCTGTCTGATGCTGTGCTGAGAACTTATAAATCATTGGGACGTCAGCAAACATCCTCCACATCTCAGTGGGATTTCAGGAGAAGCATTCATGCCACCCTGGTCAATCCCACTGCTGCTCTCCACCTCTTCTGTTGAAGGCTCTGCTGGGTCCTGCAGAAGT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044899 True 338 lncRNA 0.48 2 40814743 40815221

Neighbor

gene id symbol gene type direction distance location
XLOC_021939 CR405692.1 coding upstream 61925 40752704 ~ 40752818 (+)
XLOC_021938 cdh24a coding upstream 69892 40604951 ~ 40744851 (+)
XLOC_021937 NA coding upstream 287760 40524394 ~ 40526983 (+)
XLOC_021936 CR354556.3 coding upstream 334161 40477220 ~ 40480582 (+)
XLOC_021935 CR354556.1 coding upstream 342655 40466502 ~ 40472088 (+)
XLOC_021941 NA coding downstream 42979 40858200 ~ 40866526 (+)
XLOC_021942 LO017845.1 coding downstream 93362 40908583 ~ 40938467 (+)
XLOC_021943 reps2 coding downstream 136222 40951443 ~ 40996780 (+)
XLOC_021944 NA coding downstream 189811 41005032 ~ 41019226 (+)
XLOC_021945 CABZ01056843.1 coding downstream 206290 41021511 ~ 41155139 (+)
XLOC_021932 CABZ01067001.1 non-coding upstream 508372 40306244 ~ 40306371 (+)
XLOC_021946 NA non-coding downstream 249931 41065152 ~ 41065598 (+)
XLOC_021947 CABZ01056826.1 non-coding downstream 372009 41187230 ~ 41199322 (+)

Expression


Co-expression Network