XLOC_021946



Basic Information


Item Value
gene id XLOC_021946
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 41065152 ~ 41065598 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00044696
catttgtttttccttctatagaagtcaatggttacaggtttcaagatTTTCTTAGTAAAGCTATTTTTCACTTTTGGATgaacttttaaagggatagttcacccaaaaatgaaaaatagtttCATGAAGAAAATTTcgaaactgtaaccattgacttacatagtatttgtttttccaactattgaggtcaatggttactggtttaaagctaaatttcatttttgggtgaattatccctttaaaagttGTGTTCTGCACTGTTGTACCATTGTATCGAGTCTATTAAAGTAAGAATTAATTGACAACAGGCTGTTGAATTACTACAAAATAACACACACTCCAGTTTGAAGCATTACCGCGTCTAAAGACACTGTTCAGAAGTTGTTTTTCActgtgtcaggtttttgtcctcaaattGCTCCTGTATGTTGGACTAATTTCTCACGC

Function


GO:

id name namespace
GO:0035239 tube morphogenesis biological_process
GO:0060562 epithelial tube morphogenesis biological_process

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00044696 True 447 lncRNA 0.33 1 41065152 41065598

Neighbor


gene id symbol gene type direction distance location
XLOC_021944 NA coding upstream 45926 41005032 ~ 41019226 (+)
XLOC_021943 reps2 coding upstream 68372 40951443 ~ 40996780 (+)
XLOC_021942 LO017845.1 coding upstream 126685 40908583 ~ 40938467 (+)
XLOC_021941 NA coding upstream 198626 40858200 ~ 40866526 (+)
XLOC_021940 NA coding upstream 249931 40814743 ~ 40815221 (+)
XLOC_021947 CABZ01056826.1 coding downstream 121632 41187230 ~ 41199322 (+)
XLOC_021948 nhsa coding downstream 135256 41200854 ~ 41229194 (+)
XLOC_021949 NA coding downstream 175643 41241241 ~ 41253223 (+)
XLOC_021950 NA coding downstream 241457 41307055 ~ 41309447 (+)
XLOC_021951 CU914487.1 coding downstream 613988 41679586 ~ 41692463 (+)
XLOC_021939 CR405692.1 non-coding upstream 312334 40752704 ~ 40752818 (+)
XLOC_021937 NA non-coding upstream 538169 40524394 ~ 40526983 (+)
XLOC_021952 NA non-coding downstream 696971 41762569 ~ 41763164 (+)
XLOC_021956 NA non-coding downstream 873503 41939101 ~ 41950026 (+)

Expression



Co-expression Network