XLOC_021952



Basic Information


Item Value
gene id XLOC_021952
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 41762569 ~ 41763164 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00044701
TTCCCGAATTAAACTATACCGAGGCGCTGTGAAGACTATCCCAGCCTCGAAATTGTCCTTCTTGAGGAACCCCAAGGAGAAAAAGTCGTCTTCCTCCATGGGTTCCTCATCATTATTGGTCTCCACGGGCAGCGGGCGCAGAACTTTACTATCCCGCCACATGATCGCGCTGGGCGGCTTGGCTCTTTTGCAGCCCCGCCGGAGGCTCGTTACTCTCCGCAGCTCCATGAGTTTATTATTACCCCTTGCGTTGACAGCATATGTTTCGGGGCAATAATCCTGTTTTTCATAACGTCTCTGAATGAGAGTTGCGGAAAGTCAAATCGATTagtttgttttggtgttttttgTCACTTCCTCCATCAATCGTCTGACTgacataaacaataaaaacatcaaCAGGAGAGAGCAGAGGGGGCGTGGCGAACTGGCGGACTGTTCCATTTCTTCGAAACTACAGGTAGGGTGGGTCACCCCCATAcgtcatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagata

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00044701 True 596 lncRNA 0.45 1 41762569 41763164

Neighbor


gene id symbol gene type direction distance location
XLOC_021951 CU914487.1 coding upstream 70106 41679586 ~ 41692463 (+)
XLOC_021950 NA coding upstream 453122 41307055 ~ 41309447 (+)
XLOC_021949 NA coding upstream 509346 41241241 ~ 41253223 (+)
XLOC_021948 nhsa coding upstream 533375 41200854 ~ 41229194 (+)
XLOC_021947 CABZ01056826.1 coding upstream 563247 41187230 ~ 41199322 (+)
XLOC_021953 pdyn coding downstream 36584 41799748 ~ 41802335 (+)
XLOC_021954 scp2b coding downstream 68060 41831224 ~ 41854104 (+)
XLOC_021955 podn coding downstream 125929 41889093 ~ 41931897 (+)
XLOC_021956 NA coding downstream 175937 41939101 ~ 41950026 (+)
XLOC_021957 NA coding downstream 239531 42002695 ~ 42075952 (+)
XLOC_021945 CABZ01056843.1 non-coding upstream 607430 41021511 ~ 41155139 (+)
XLOC_021959 CABZ01049773.1 non-coding downstream 428075 42191239 ~ 42191353 (+)
XLOC_021960 NA non-coding downstream 428662 42191826 ~ 42192488 (+)
XLOC_021964 cyp2aa6 non-coding downstream 552901 42316065 ~ 42330488 (+)
XLOC_021946 NA non-coding upstream 696971 41065152 ~ 41065598 (+)

Expression



Co-expression Network