XLOC_021964 (cyp2aa6)


Basic Information

Item Value
gene id XLOC_021964
gene name cyp2aa6
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 42316065 ~ 42330488 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00043464
GTGTTTGTCTGTCATCATGTTAGCAGCTCTCCTGAAGTTAGACTTGTCCTCCGTGGGCTTAAGTCTGTTTCTAGGCTTAATTTTTCTGGTTCTGTTTGAGATCTTCAGAATTCATTCCTGCAAAGGTCGATTTCCACCTGGTCCAACACCTCTGCCTTTTGTGGGAAGCATACCTCATTTCTTGAACAACCCAATGGGCTTCATAAAATCATTATCTCAGTATGGAGAGATGACTACTGTATATCCTGGGAGAAAGCCGGCGATAATTCTTAACACTCTTCAGCTCATGAAGGAAGCTTTAGTCCAGAATGGTTCATCTTTCTCTGGAAGGCCACCAGTACCTGTTTTCAACTGGGTCACTGACGGATATGGAATCGTAATGGCCACATTTGGTCACTCGTGGAGGCAGCAGAGACGGTTTGCTCTGCACACACTCAGAAACTTTGGTCTGGGAAAGAAGTCTGTGGAGGAACGTGTGACGGAGGAAAGCGGTTACCTGATTTCTGAATTTCTCAAAGCTGAAGGCAAACCGTTCAACCCCCAACACGCAATACACAACGCTGCTGCCAACATTATCTGCTCTATCGTGTTTGGAGATCGATTTGACTATGATAACAAGAGCTTCACGTATCTTCTGGAAATCATAAAAGAAAACATCATTCAGGCAGGATCACTTGTTGGACAGGTCTTTAACTTGGTTCCCATCATCAAACATGTCCCAGGGCCACATCAGAAAATATATCAGAATGGCCAAGCATTTAAGTCTTTCATCAGGGAATCGGTCAAAGAGCACAGACAAACTCTGGATCCTGACAGTCCACGGGATTTTATCGATGCCTACCTGCTGGAGATGGAGAAACAAAAGTCCACGCAGGACTCCACTTTTCACGAGGATAACATGGTTATGGCAGTAGGTGATTTGTTCTTGGCTGGAAGCGACACTACAGCAACCACCATTAGATGGGGACTCATCTACCTGACTCAAAACCCAGATGTACAAGAGAGATGTCATGAAGAGATTGTTCGGGTTCTGGGTTTTGACCGATTGCCCAGCATGGATGACCGTGACCGACTACCATACACACACGCCACTGTTCACGAGTTTCAGCGCTGTGCAAACCTTGTGCACAACTGGAGTGCCTCATCAAACAACTCAAGCAACAAAACTACGAGGATACGACATTCCCCAGGGAACTCAGATATTGATTAACTTGACGGAAATTTTGACTAACAAGGAGCACTGGAAGCATCCAGACACTTTTAACCCAGAGAATTTCTTAGACGATAAGGGACATTTCTTCAAACCGGAGGCTTTTCTTCCTTTCTCCTTGGGTCCAAGGGCCTGTCTTGGTGAGACTCTGGCTAAAGCTGAGCTCTTCCTCTTCGTCACTTCTCTCCTTCAGCGCATTCGTTTCTCCTGGCCAACTGGAGAGAAGTTGCCGGATATGAATGGGATTTTCGGCATAGTTCGCTCTCCTAAACCATTCAACATCATTTGCCATAGCAGAGGTTCAAAACACTGACCATCAGTGTCCGTGCTCATATTTACAAGTGTTTCCAAAGATTTAGACTTGTTTTAAAATTTACTGTATTGATAAAGAATGTTGTATTACCTTACAACACTATACATTGCTGTAAATTAAAGTGCTGAAATAGTATAGCGTGAGACAATGCCAAGGTTGTGGGATCGATTCCAAAGGAAAACGAGCAATAATTTGTACCTTCAGTGCagtgtaagtcactttggataaaagcatctgataaatgcatatattaaaatgtaataccgATTTAACAGATCAAA

Function

symbol description
cyp2aa6 Predicted to enable heme binding activity; iron ion binding activity; and oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in liver.

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen molecular_function
GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen molecular_function
GO:0004497 monooxygenase activity molecular_function
GO:0005506 iron ion binding molecular_function
GO:0046872 metal ion binding molecular_function
GO:0016491 oxidoreductase activity molecular_function
GO:0020037 heme binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-2932 Predicted to enable heme binding activity; iron ion binding activity; and oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in liver.

Ensembl:

ensembl_id ENSDARG00000103590

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00043464 True 1804 unprocessed_pseudogene 0.44 9 42316065 42330488

Neighbor

gene id symbol gene type direction distance location
XLOC_021963 cyp2aa12 coding upstream 9733 42292748 ~ 42306332 (+)
XLOC_021962 CABZ01065131.1 coding upstream 26772 42272588 ~ 42289293 (+)
XLOC_021961 tut4 coding upstream 56770 42254960 ~ 42259295 (+)
XLOC_021960 NA coding upstream 123577 42191826 ~ 42192488 (+)
XLOC_021959 CABZ01049773.1 coding upstream 124712 42191239 ~ 42191353 (+)
XLOC_021965 cyp2aa7 coding downstream 5596 42336084 ~ 42409339 (+)
XLOC_021966 cyp2aa11 coding downstream 16311 42346799 ~ 42358353 (+)
XLOC_021967 cyp2aa4 coding downstream 31849 42362337 ~ 42372651 (+)
XLOC_021968 cyp2aa9 coding downstream 84164 42414652 ~ 42428299 (+)
XLOC_021969 cyp2aa1 coding downstream 103860 42434348 ~ 42451859 (+)
XLOC_021957 NA non-coding upstream 240113 42002695 ~ 42075952 (+)
XLOC_021956 NA non-coding upstream 366039 41939101 ~ 41950026 (+)
XLOC_021952 NA non-coding upstream 552901 41762569 ~ 41763164 (+)
XLOC_021972 CT997819.1 non-coding downstream 172077 42502565 ~ 42502690 (+)
XLOC_021973 CT997819.2 non-coding downstream 194504 42524992 ~ 42576879 (+)
XLOC_021974 NA non-coding downstream 255380 42585868 ~ 42588542 (+)
XLOC_021975 CT997819.4 non-coding downstream 274456 42604944 ~ 42605059 (+)
XLOC_021976 CT997819.5 non-coding downstream 296046 42626534 ~ 42643126 (+)

Expression


Co-expression Network