XLOC_021974


Basic Information

Item Value
gene id XLOC_021974
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 42585868 ~ 42588542 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044908
GAACGCAGGGCTCGTCTGATTGATTGAATGTCCTGGTTTGATGGCTTTCACATGAGGCTGAAACCAAGCTGAGCTCCATCTGCACCATATGAAAGCCCTAATAATGACCATTGGGAGTCTGAGACCTGCAGAACCAGGGAAAATTCCCTCCAAGGCGTCTGGCCGGACTCTCCTGTCATCATGATGCCGTTTGTCTCTCTGTTTCTCGTCCTGAGGGAGCGACTGGCAGAAGGGATGAGAGAAGCCGGCTGAAACGTGTGAAAGAAATGTGCGACGGACTTGATTCCTCGTCCCTCCAGCAACAGATGGGCTCCTAATGAACAATCTTCCAGCCAACAATGTGGAATGAGCGGCGCCACGTCAAGAGCCGCACACACAGACAGCGGGAGCAGGAGTCAGACTCACGATTCAGGCCTGGGTTTTTTTCTTAAGCCGAGAGAAGAGATGTCACTACAGGTGAGCACAGGAGGTGACCtaaaccacctgtccactcgctGGTATCACAACGACCACCTGTTTCCACGGCAACACTGCACTGATGGGTCACATCACATTTAAGAGGTTACTGTAATTTTCACTTGGCATCTCTAAGAATGAGGTAACTCTAAAGTTTTAATGATCACTTTTATTCATCGAGAGCCataaggataataataatgacacacacacacacacacagtgtgagaAAAATGCtgggtcaacatgaaggaattaagtttgcTTCAAGTGTTTAAAAGTTTAAGTGGactgagcataaaacaattaagttgacccagggccggagtgggacttattttcagccctggagtttcaagccagagcGGCCCACCTCAGCTCACGACTGTctatatcagtggtcaccaaacttgttcctggagggctggtgtcctgcagattttagctccaac

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044908 True 908 lncRNA 0.48 2 42585868 42588542

Neighbor

gene id symbol gene type direction distance location
XLOC_021973 CT997819.2 coding upstream 8989 42524992 ~ 42576879 (+)
XLOC_021972 CT997819.1 coding upstream 83178 42502565 ~ 42502690 (+)
XLOC_021971 cyp2aa3 coding upstream 91992 42482137 ~ 42493876 (+)
XLOC_021970 cyp2aa2 coding upstream 118952 42454292 ~ 42466916 (+)
XLOC_021969 cyp2aa1 coding upstream 134009 42434348 ~ 42451859 (+)
XLOC_021975 CT997819.4 coding downstream 16402 42604944 ~ 42605059 (+)
XLOC_021976 CT997819.5 coding downstream 37992 42626534 ~ 42643126 (+)
XLOC_021977 cyp2ae1 coding downstream 55418 42643960 ~ 42666469 (+)
XLOC_021978 FO904880.1 coding downstream 102362 42690904 ~ 42721150 (+)
XLOC_021979 myl9a coding downstream 221513 42810055 ~ 42823356 (+)
XLOC_021964 cyp2aa6 non-coding upstream 255380 42316065 ~ 42330488 (+)
XLOC_021960 NA non-coding upstream 393380 42191826 ~ 42192488 (+)
XLOC_021959 CABZ01049773.1 non-coding upstream 394515 42191239 ~ 42191353 (+)
XLOC_021980 NA non-coding downstream 471859 43060401 ~ 43063591 (+)
XLOC_021983 CR545469.2 non-coding downstream 700452 43288994 ~ 43294959 (+)
XLOC_021984 BX322612.1 non-coding downstream 746918 43335460 ~ 43335575 (+)

Expression


Co-expression Network