XLOC_021973 (CT997819.2)


Basic Information

Item Value
gene id XLOC_021973
gene name CT997819.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 42524992 ~ 42576879 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00043477
GACAACGTAAATACAACTCAACGCAAATAGCAGCTCGAGATTGTGTCTGATGATTATTCATTGAATTCCCCTTTTCCAGTTCTGCAGTTCACCCAAGAGACCAGGACGGATAATGGAGATTCAGAGAGTGAAAGCTAGAGGGTTTTTCTGGAAACGCCATGTGCTTTTTCCCAGAGGATGCACCTGAAGAGAAGCTGAAGCATTCATTCAGGCGCTCCGGAGAAAAGGCAGAttgaaaatatttcaaataaaatgctTTCTA
>TCONS_00044907
CTCAACGCAAATAGCAGCTCGAGATTGTGTCTGATGATTATTCATTGAATTCCCCTTTTCCAGAAACGGCGGTGTTCATCCATTCAGAGCCTCCCGTTTGGGTGGGAAATGTAGCAGGACCAGGGTTCAGCGTGGGACCTCAGGAGGCAATGAAGCAGTGCGTTTCCATCTTCCTGAAGagATCCAATGCGGCAGCGGCGgctatcagcctgtcatactgagcaaaaCAAAGATGATTGACGTTCccccacaagatggcgacagagactgcataaaaAATAAGTCCTTAGTGgataaaaaacagcattttttcagCATAAGCTTCAAACTACAGCAGAGCAAATCACTACAGAACAGatgttttgagcgtgtggaaaaaaaaagttaaacaacaaaaaatcatCTATTTTGTCAACTGAAATATGCTCACCCTATTTTAATACAGAGAGAGATGAGGATGGAAAACGTCAGCACTCAcaggaaaaggaaaaaaaagaaaagtatatACAGGAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000092072

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00043477 False 262 processed_transcript 0.42 2 42524992 42545825
TCONS_00044907 True 513 lncRNA 0.42 4 42525008 42576879

Neighbor

gene id symbol gene type direction distance location
XLOC_021972 CT997819.1 coding upstream 22302 42502565 ~ 42502690 (+)
XLOC_021971 cyp2aa3 coding upstream 31116 42482137 ~ 42493876 (+)
XLOC_021970 cyp2aa2 coding upstream 58076 42454292 ~ 42466916 (+)
XLOC_021969 cyp2aa1 coding upstream 73133 42434348 ~ 42451859 (+)
XLOC_021968 cyp2aa9 coding upstream 96693 42414652 ~ 42428299 (+)
XLOC_021974 NA coding downstream 8989 42585868 ~ 42588542 (+)
XLOC_021975 CT997819.4 coding downstream 28065 42604944 ~ 42605059 (+)
XLOC_021976 CT997819.5 coding downstream 49655 42626534 ~ 42643126 (+)
XLOC_021977 cyp2ae1 coding downstream 67081 42643960 ~ 42666469 (+)
XLOC_021978 FO904880.1 coding downstream 114025 42690904 ~ 42721150 (+)
XLOC_021964 cyp2aa6 non-coding upstream 194504 42316065 ~ 42330488 (+)
XLOC_021960 NA non-coding upstream 332504 42191826 ~ 42192488 (+)
XLOC_021959 CABZ01049773.1 non-coding upstream 333639 42191239 ~ 42191353 (+)
XLOC_021957 NA non-coding upstream 449040 42002695 ~ 42075952 (+)
XLOC_021980 NA non-coding downstream 483522 43060401 ~ 43063591 (+)
XLOC_021983 CR545469.2 non-coding downstream 712115 43288994 ~ 43294959 (+)

Expression


Co-expression Network