XLOC_021977 (cyp2ae1)


Basic Information

Item Value
gene id XLOC_021977
gene name cyp2ae1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 42643960 ~ 42666469 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00043480
aaagggactaagccgacaagaaaatgaatgatataataACCGCCAAtgtttccagcaagtttttacgcagtggatgcccttccagccgcaacccatctctgggaaacatccacacacattcacacactacggacaatttagcttacccgattcacctgtaccgcatgactttggactggagcacccggaggaaacccacgcgaaggcagggagaacatgcaaactccacacagaaacgccaactgagccgaggttcgaaccagcgaccttcctgctgtgaggcgacactgaATGATTAAcatgtaatatattattaaaataagtagGAAAACTAAAAGCACAGAAAGTATTAATGAAATTAAGTTAATTATGTTTCTGACTTAAGtttttatgttgtgtgtgtgattttaagtcagtttaaagttaatttaaatctGACACACTCATAAGGTTATTTTCatttaactttaaaatttaaggcaaccagtaattattttacagtttaagatttaaaacacattttaatgattatatttgtaaatatttttgtatataatacaggcattattttataatacaaaatatgttatttttaatataatatttttgcgtATGTGACTTTAAAAGTGGGCGTGTCGTATAGGCGGGTGCGCGTGACGTCATCACACCAACATTTCCGCACTTTCTCGTCAGCCTCCAGTAACTTTCTGCAAGATTGTTTTTCATTCGAGCCGCACTTTTTGGTTCTCCAATCACTGCTTGATAAATAAACTGCGTTCTGTGACGATGTCATCAGTGTTCTCTCAGCTGATTGGCCAGTGGCTGGATGTTCAGGGATTCCTGATATTTCTCTGTGTGCTGCTGCTGGTGAAACACTTCCGAGATGTTTATTCAAAGAACATGCCCCCAGGACCCTTCCCTCTGCCTTTTGTTGGAAACCTCACAAACATCGGCTTTAGTGATCCACTGGGCTCCTTTCAGAGGATTGCAGAGAAGTATGGAGATGTGTGCACACTTTACCTGGGAACCAAGCCCTGTATACTGATGACTGGATATGATACTTTAAAAGAGGCTTTTGTGGAGCAGGCGGACATCTTTACGGACCGACCGTACTTTCCTATAGTGGACAAGCTTGGAAATGGGAAAGGTCTGATAATGTCCAGTGGTCACATGTGGCGTCAGCAGAGGCGTTTTGCTCTGGCAACATTGAAATACTTCGGTGTGGGGAAGAAAACTCTAGAAAACGCCATCCTGCAGGAGTGTCGCTTTCTCTGTGACTCCTTACAGGCTGAACGAGGTTTGCCCTTTGACCCTCAGCATCTTGTGACCAACGCTGTGTCTAATATCATCTGCGGGTTGGTATTCGGTCACCGCTTTGAGTACGATGACCATCAGTTTCATCTAATGCAGACGTACATCAATAACATCCTACAGCTTCCCATCTCAAACTGGGGTCGGTTGTATAATGAGTTTCCCACCCTGATGTCGCTGCTGCCAGGAAAGCACCAGACGGCGTTCGCCAGCATGTCTAAACTTCAGCCATTCCTAAAGGAGGAAATCACCAAACACCAGCAGGACAGAGAGCCGTCCAGCCCCAGAGACTACATCGACTGCTATCTGGAGGAGATCGAGAAGTGTAAAGACAGTGATGCCGAGTTCACGGAGGAGAACCTGATGTTCTGTGTGGTGGATCTGTTTGGAGCAGGAACAGAAACCACTTCCAACACTCTGAGATGGGCTTTAGCTTTCATGGTCAAATATCCTGATGTTCAAGAGAAGGTGCAGTCAGAGATCGATCAGGTGATTGGACAGACCCGCCAACCACTGATGGATGACCGGACAAATCTGCCGTACACCTATGCCGTGATCCATGAAATTCAGAGGTTTGCCAACATTGTTACCTTTACGCCTCCCAGAGTGGCCAACAAGGACACGACAGTGGGAGGACAGCTCATCCCAAAGGGTGTGATTGTTTTGCCGATGCTGAAACCAATCCTACTGGACAAGAAGGAGTACAGCACTCCATACGATTTTAACCCGGATCACTTTCTGGACCAAAATGGCaagtttttaaagaaagaaaatttcATCCCTTTTTCAATAGGTAAGCGGATGTGTCCAGGTGAGCAGCTGGCCCGTATGGAGctcttcctcttcttcatctCTCTGATGCAGCATTTCACTTTCCTGCCTGTCGAGGGACAAAAGTTGAGTCTAAAAGGAACCACGAGCGTCTCTTCTGCTCCTCAACCCTTCCAGATCCGTGCTGTGCCTCGATAG
>TCONS_00043481
ATGTCATCAGTGTTCTCTCAGCTGATTGGCCAGTGGCTGGATGTTCAGGGATTCCTGATATTTCTCTGTGTGCTGCTGCTGGTGAAACACTTCCGAGATGTTTATTCAAAGAACATGCCCCCAGGACCCTTCCCTCTGCCTTTTGTTGGAAACCTCACAAACATCGGCTTTAGTGATCCACTGGGCTCCTTTCAGAGGATTGCAGAGAAGTATGGAGATGTGTGCACACTTTACCTGGGAACCAAGCCCTGTATACTGATGACTGGATATGATACTTTAAAAGAGGCTTTTGTGGAGCAGGCGGACATCTTTACGGACCGACCGTACTTTCCTATAGTGGACAAGCTTGGAAATGGGAAAGGTCTGATAATGTCCAGTGGTCACATGTGGCGTCAGCAGAGGCGTTTTGCTCTGGCAACATTGAAATACTTCGGTGTGGGGAAGAAAACTCTAGAAAACGCCATCCTGCAGGAGTGTCGCTTTCTCTGTGACTCCTTACAGGCTGAACGAGGTTTGCCCTTTGACCCTCAGCATCTTGTGACCAACGCTGTGTCTAATATCATCTGCGGGTTGGTATTCGGTCACCGCTTTGAGTACGATGACCATCAGTTTCATCTAATGCAGACGTACATCAATAACATCCTACAGCTTCCCATCTCAAACTGGGGTCGGTTGTATAATGAGTTTCCCACCCTGATGTCGCTGCTGCCAGGAAAGCACCAGACGGCGTTCGCCAGCATGTCTAAACTTCAGCCATTCCTAAAGGAGGAAATCACCAAACACCAGCAGGACAGAGAGCCGTCCAGCCCCAGAGACTACATCGACTGCTATCTGGAGGAGATCGAGAAGTGTAAAGACAGTGATGCCGAGTTCACGGAGGAGAACCTGATGTTCTGTGTGGTGGATCTGTTTGGAGCAGGAACAGAAACCACTTCCAACACTCTGAGATGGGCTTTAGCTTTCATGGTCAAATATCCTGATGTTCAAGAGAAGGTGCAGTCAGAGATCGATCAGGTGATTGGACAGACCCGCCAACCACTGATGGATGACCGGACAAATCTGCCGTACACCTATGCCGTGATCCATGAAATTCAGAGGTTTGCCAACATTGTTACCTTTACGCCTCCCAGAGTGGCCAACAAGGACACGACAGTGGGAGGACAGCTCATCCCAAAGGGTGTGATTGTTTTGCCGATGCTGAAACCAATCCTACTGGACAAGAAGGAGTACAGCACTCCATACGATTTTAACCCGGATCACTTTCTGGACCAAAATGGCaagtttttaaagaaagaaaatttcATCCCTTTTTCAATAGGTAAGCGGATGTGTCCAGGTGAGCAGCTGGCCCGTATGGAGctcttcctcttcttcatctCTCTGATGCAGCATTTCACTTTCCTGCCTGTCGAGGGACAAAAGTTGAGTCTAAAAGGAACCACGAGCGTCTCTTCTGCTCCTCAACCCTTCCAGATCCGTGCTGTGCCTCGATAGACTGTCAGATTTCTTAAAGGAACAGTACACCAACATATGAACTTTTCCTCATCATTTCTTCACACTCAGGTGATTCtgaacttttatgagtttctttcttctgttaaacacaaagcaagatactttgaagaatgctggaaaaaaaaaacatttatatagtTGGAACCAAAATAATACCATATGCTACTCGAATACGATGCATTAGCAAACATGAATAATATGTTCATGTTTGGAGTTTGtgctaaaacacttttaaaagaggattaaacacagttgtgtgacaacagtgtgtgaatataaccagcttctaatggtaaaatgtaataatttttaattttgtaatcgCTCTTGATAAAAAACGTCtcc

Function

symbol description
cyp2ae1 Predicted to enable heme binding activity; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen; and steroid hydroxylase activity. Predicted to be involved in exogenous drug catabolic process; organic acid metabolic process; and xenobiotic metabolic process. Predicted to be active in cytoplasm and intracellular membrane-bounded organelle.

GO:

id name namespace
GO:0042738 exogenous drug catabolic process biological_process
GO:0006082 organic acid metabolic process biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0006805 xenobiotic metabolic process biological_process
GO:0043231 intracellular membrane-bounded organelle cellular_component
GO:0005737 cytoplasm cellular_component
GO:0008395 steroid hydroxylase activity molecular_function
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen molecular_function
GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen molecular_function
GO:0004497 monooxygenase activity molecular_function
GO:0005506 iron ion binding molecular_function
GO:0046872 metal ion binding molecular_function
GO:0016491 oxidoreductase activity molecular_function
GO:0020037 heme binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-090312-107 Predicted to enable heme binding activity; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen; and steroid hydroxylase activity. Predicted to be involved in exogenous drug catabolic process; organic acid metabolic process; and xenobiotic metabolic process. Predicted to be active in cytoplasm and intracellular membrane-bounded organelle.

Ensembl:

ensembl_id ENSDARG00000013524

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00043480 False 2280 mRNA 0.45 10 42643960 42666103
TCONS_00043481 True 1860 mRNA 0.45 9 42652877 42666469

Neighbor

gene id symbol gene type direction distance location
XLOC_021976 CT997819.5 coding upstream 834 42626534 ~ 42643126 (+)
XLOC_021975 CT997819.4 coding upstream 38901 42604944 ~ 42605059 (+)
XLOC_021974 NA coding upstream 55418 42585868 ~ 42588542 (+)
XLOC_021973 CT997819.2 coding upstream 67081 42524992 ~ 42576879 (+)
XLOC_021972 CT997819.1 coding upstream 141270 42502565 ~ 42502690 (+)
XLOC_021978 FO904880.1 coding downstream 24435 42690904 ~ 42721150 (+)
XLOC_021979 myl9a coding downstream 143586 42810055 ~ 42823356 (+)
XLOC_021980 NA coding downstream 393932 43060401 ~ 43063591 (+)
XLOC_021981 si:dkey-65j6.2 coding downstream 510821 43177290 ~ 43252396 (+)
XLOC_021982 tgm2a coding downstream 588859 43255328 ~ 43272125 (+)
XLOC_021983 CR545469.2 non-coding downstream 622525 43288994 ~ 43294959 (+)
XLOC_021984 BX322612.1 non-coding downstream 668991 43335460 ~ 43335575 (+)
XLOC_021987 NA non-coding downstream 965476 43631945 ~ 43632601 (+)
XLOC_021998 CU993818.1 non-coding downstream 1272655 43939124 ~ 43939823 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000193_00516020_00521242 NA coding CI01000193 null 516020 ~ 522226 (+)