XLOC_021941


Basic Information

Item Value
gene id XLOC_021941
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 40858200 ~ 40866526 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044900
CAGAGATGGATCTTAAAACAGAAACCACTGGTGACGAATAGAATGATGACCAGATGAGAAACCAGGAGACACCGCACTAGCAATGACACGGAAGACGCTGGAGATCACAGGAAACATGGAAGGGCATCAATACAATAATGAGCTTCCTTCTGATACTGGTCCAGGATCTGGCTGTGACTGTATCTGAAGATGGAGGATCCAATTAGTGGAAAAGCAAACCAGTAAATCTGACGACAGAAACCTTCAGAAAGTTCAAACGTCTCATATTAAACAGGCAGATCTTCCTCCTAATGCTCCTCAATCCTGGCTTTCCCTCAGCGGAGGATCAGATCAATTTCATTGGCTGAAGTGTGATGGATGCACACACCCACGTTTCCTAATGGGGAAAGAAACGTGCGCTTTTGACACCGGAAAATTGGCTAATCTGTTACTGCGCATGAAGTGCAGCGTCTTTTTCATAAATTATTGATTCGCCCTAATAATTCATTGAACAATGTTGCTGAATAAACAGGCACCTGAGCTCATAATTCAGACATGCTGCGGATTAGCCTGTGGCAACGTCAGCTAAATTAAAAAGCTTGTGAAATGCTTTGGCCAGCATATAGTTTTCTTTGGGATTTACTAGTTAAACAGGGTGAGCTTTACTAAATGACTGCATATTAGCTAGAAAATGACACTCAATTGTGTTGCACTGTTTACAAAAAGGCCCTCAGATAACACTTTACTGTAGGAAGAGGGCCAATTCTTacttttaaagagacagtcaaCCAAAAATCATtgaggtattttttttttatctattgaactcgaaagaagatattttgaagaatgttggatgcTGGTAATTATACTATGGAAGTTATTGGTTACATATCAAGAGAATAGGGAAAAAAGAaaatctcaaactggtttggaattaGGGtgagttcatttttgggtgaactttgccTTTAAGTAGTCGCTTATTAGCTAAATGCTTTGGCCAGCATATaggtttttttttggggggggggggatttaCTAGGTATACCGGATGGGCTTTGCTAAATAACTACATATTAGATAGAAAATGACTCTCAATTGTGTTGCACTGTTTACAAAAATGCCCGTAG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044900 True 1112 lncRNA 0.40 2 40858200 40866526

Neighbor

gene id symbol gene type direction distance location
XLOC_021940 NA coding upstream 42979 40814743 ~ 40815221 (+)
XLOC_021939 CR405692.1 coding upstream 105382 40752704 ~ 40752818 (+)
XLOC_021938 cdh24a coding upstream 113349 40604951 ~ 40744851 (+)
XLOC_021937 NA coding upstream 331217 40524394 ~ 40526983 (+)
XLOC_021936 CR354556.3 coding upstream 377618 40477220 ~ 40480582 (+)
XLOC_021942 LO017845.1 coding downstream 42057 40908583 ~ 40938467 (+)
XLOC_021943 reps2 coding downstream 84917 40951443 ~ 40996780 (+)
XLOC_021944 NA coding downstream 138506 41005032 ~ 41019226 (+)
XLOC_021945 CABZ01056843.1 coding downstream 154985 41021511 ~ 41155139 (+)
XLOC_021946 NA coding downstream 198626 41065152 ~ 41065598 (+)
XLOC_021935 CR354556.1 non-coding upstream 386112 40466502 ~ 40472088 (+)
XLOC_021947 CABZ01056826.1 non-coding downstream 320704 41187230 ~ 41199322 (+)
XLOC_021949 NA non-coding downstream 374715 41241241 ~ 41253223 (+)

Expression


Co-expression Network