G250436


Basic Information

Item Value
gene id G250436
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 35310650 ~ 35311031 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU285638
gactgtggaaagaactgaaaactgctgttcacaaatgctctccatccaacctcactgagctcgagctgttttgcaaggaggaatgggaaaaaaattcagtctctcgatgtgcaaaactgatagagacataccccaagcgacttacagctgtaatcgcagcaaaaggtggcactacaaagtattaacttaagggggctgaataattttgcacgcccaatttttcagtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttccacttcatgattgtgtcccacttgttgttgattcttcacaaaaaaatacagttttatatctttatgtttgaagcctgaaatgtggcaaaaggtcgcaaaggtcaagggggc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU285638 True 382 lncRNA 0.40 1 35310650 35311031

Neighbor

gene id symbol gene type direction distance location
LOC110519579 gmeb1 coding upstream 88776 35203647 ~ 35221874 (+)
rab42b rab42 coding upstream 140386 35153546 ~ 35173463 (+)
ctps1b LOC106584221 coding upstream 157648 35119706 ~ 35153002 (+)
LOC110519409 scmh1 coding upstream 272281 34991023 ~ 35038369 (+)
LOC110504041 LOC106605016 coding upstream 634675 34671886 ~ 34707455 (+)
serinc2l LOC106584332 coding downstream 814296 36125327 ~ 36144587 (+)
LOC110519702 LOC106584341 coding downstream 861162 36172193 ~ 36262289 (+)
LOC110519762 LOC106584688 coding downstream 982793 36293824 ~ 36301569 (+)
phactr4b LOC106584362 coding downstream 1006282 36317313 ~ 36368316 (+)
rcc1 rcc1 coding downstream 1070439 36381470 ~ 36387216 (+)
G250431 NA non-coding upstream 8640 35301808 ~ 35302010 (+)
G250428 NA non-coding upstream 14274 35296152 ~ 35296376 (+)
G250425 NA non-coding upstream 18279 35292133 ~ 35292371 (+)
G250410 NA non-coding upstream 36641 35273804 ~ 35274009 (+)
G250409 NA non-coding upstream 36961 35273195 ~ 35273689 (+)
G250486 NA non-coding downstream 67981 35379012 ~ 35379251 (+)
G250490 NA non-coding downstream 71092 35382123 ~ 35382324 (+)
G250491 NA non-coding downstream 71390 35382421 ~ 35382659 (+)
G250492 NA non-coding downstream 72296 35383327 ~ 35383535 (+)
G250493 NA non-coding downstream 73089 35384120 ~ 35384499 (+)
G249323 NA other upstream 890038 34419890 ~ 34420612 (+)
G249245 NA other upstream 1007743 34302572 ~ 34302907 (+)
G248795 NA other upstream 1297593 34006158 ~ 34013057 (+)
G251773 NA other downstream 1200543 36511574 ~ 36579307 (+)
G251845 zdhhc18 other downstream 1312579 36623610 ~ 36627542 (+)
G253299 NA other downstream 2415917 37726948 ~ 37727338 (+)
G253834 LOC100136012 other downstream 2781291 38092322 ~ 38092734 (+)
G254204 NA other downstream 3130135 38441166 ~ 38441734 (+)

Expression


Co-expression Network