G250495


Basic Information

Item Value
gene id G250495
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 35385933 ~ 35386241 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU285700
aggagttcccacatatgttgagcactaattggctgcttttccttcactctgcggtccgactcatcccaaaccttctcaatttggttgaggtcaggtgattgtggaggccaggtcatctgatgcagcactccatcactctccttcttggtaaaatagcccttacacagcctggaggggtGTTGGGTTGCCTTGTTGAAAAACACATGATAGTCCAactaaaccagatgggatggcgtataactgcagaatgctgtggtaccatactggttaagtgttcAGCAGTGTTATAATCTCTTATTGTGTTAGTAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU285700 True 309 lncRNA 0.46 1 35385933 35386241

Neighbor

gene id symbol gene type direction distance location
LOC110519579 gmeb1 coding upstream 164059 35203647 ~ 35221874 (+)
rab42b rab42 coding upstream 215669 35153546 ~ 35173463 (+)
ctps1b LOC106584221 coding upstream 232931 35119706 ~ 35153002 (+)
LOC110519409 scmh1 coding upstream 347564 34991023 ~ 35038369 (+)
LOC110504041 LOC106605016 coding upstream 709958 34671886 ~ 34707455 (+)
serinc2l LOC106584332 coding downstream 739086 36125327 ~ 36144587 (+)
LOC110519702 LOC106584341 coding downstream 785952 36172193 ~ 36262289 (+)
LOC110519762 LOC106584688 coding downstream 907583 36293824 ~ 36301569 (+)
phactr4b LOC106584362 coding downstream 931072 36317313 ~ 36368316 (+)
rcc1 rcc1 coding downstream 995229 36381470 ~ 36387216 (+)
G250493 NA non-coding upstream 1434 35384120 ~ 35384499 (+)
G250492 NA non-coding upstream 2398 35383327 ~ 35383535 (+)
G250491 NA non-coding upstream 3274 35382421 ~ 35382659 (+)
G250490 NA non-coding upstream 3609 35382123 ~ 35382324 (+)
G250486 NA non-coding upstream 6682 35379012 ~ 35379251 (+)
G250496 NA non-coding downstream 1163 35387404 ~ 35387667 (+)
G250497 NA non-coding downstream 1500 35387741 ~ 35457768 (+)
G250555 NA non-coding downstream 96703 35482944 ~ 35483191 (+)
ptprub ptpru non-coding downstream 98906 35258095 ~ 35611096 (+)
G250560 NA non-coding downstream 103954 35490195 ~ 35490394 (+)
G249323 NA other upstream 965321 34419890 ~ 34420612 (+)
G249245 NA other upstream 1083026 34302572 ~ 34302907 (+)
G248795 NA other upstream 1372876 34006158 ~ 34013057 (+)
G251773 NA other downstream 1125333 36511574 ~ 36579307 (+)
G251845 zdhhc18 other downstream 1237369 36623610 ~ 36627542 (+)
G253299 NA other downstream 2340707 37726948 ~ 37727338 (+)
G253834 LOC100136012 other downstream 2706081 38092322 ~ 38092734 (+)
G254204 NA other downstream 3054925 38441166 ~ 38441734 (+)

Expression


Co-expression Network