Gene
RNA
| Item | Value |
|---|---|
| gene id | G253022 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 37638313 ~ 37638677 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Tc1-like transporase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU288427 | True | 271 | lncRNA | 0.47 | 2 | 37638313 | 37638677 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110519939 | LOC106604981 | coding | upstream | 148743 | 37428004 ~ 37489579 (+) |
| LOC110519936 | LOC106586041 | coding | upstream | 213977 | 37419106 ~ 37424336 (+) |
| LOC110519932 | LOC106591969 | coding | upstream | 978760 | 36657467 ~ 36659553 (+) |
| rcc1 | rcc1 | coding | upstream | 1251097 | 36381470 ~ 36387216 (+) |
| phactr4b | LOC106584362 | coding | upstream | 1269997 | 36317313 ~ 36368316 (+) |
| si:ch211-184m13.4 | LOC106586045 | coding | downstream | 50111 | 37688788 ~ 37691898 (+) |
| LOC110519942 | LOC106586050 | coding | downstream | 110018 | 37748695 ~ 37756709 (+) |
| LOC110519944 | LOC106586047 | coding | downstream | 595666 | 38234343 ~ 38250022 (+) |
| LOC110519946 | NA | coding | downstream | 997269 | 38635946 ~ 38760490 (+) |
| LOC110519950 | LOC106586053 | coding | downstream | 1533220 | 39171897 ~ 39214104 (+) |
| G252894 | NA | non-coding | upstream | 239894 | 37398220 ~ 37398419 (+) |
| G252891 | NA | non-coding | upstream | 242592 | 37395515 ~ 37395721 (+) |
| G252866 | NA | non-coding | upstream | 253508 | 37384600 ~ 37384805 (+) |
| G252828 | NA | non-coding | upstream | 264574 | 37373322 ~ 37373739 (+) |
| G253305 | NA | non-coding | downstream | 90328 | 37729005 ~ 37752270 (+) |
| G253313 | NA | non-coding | downstream | 105288 | 37743965 ~ 37744432 (+) |
| G253316 | NA | non-coding | downstream | 122109 | 37760786 ~ 37761394 (+) |
| G253392 | NA | non-coding | downstream | 163931 | 37802608 ~ 37802882 (+) |
| G251845 | zdhhc18 | other | upstream | 1010771 | 36623610 ~ 36627542 (+) |
| G251773 | NA | other | upstream | 1113140 | 36511574 ~ 36579307 (+) |
| LOC110519579 | gmeb1 | other | upstream | 2416941 | 35203647 ~ 35221874 (+) |
| rab42b | rab42 | other | upstream | 2464850 | 35153546 ~ 35173463 (+) |
| G249323 | NA | other | upstream | 3217701 | 34419890 ~ 34420612 (+) |
| G253299 | NA | other | downstream | 88271 | 37726948 ~ 37727338 (+) |
| G253834 | LOC100136012 | other | downstream | 453645 | 38092322 ~ 38092734 (+) |
| G254204 | NA | other | downstream | 802489 | 38441166 ~ 38441734 (+) |
| G254445 | NA | other | downstream | 961810 | 38600487 ~ 38600866 (+) |
| G254816 | NA | other | downstream | 1204833 | 38843510 ~ 38844556 (+) |
