G261383


Basic Information

Item Value
gene id G261383
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 43981673 ~ 43982138 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU297360
aaatcatacaatgtgattttctggatttttgttttagattccgtctctcacagttgaagtgtacctatgataataattaaagacctctacatgctttgtaagtaggaaaacctgcaaaatcggcagtgtatcaaatacttgttctccccactgtatgtacatattctcattcaccccttttagatttgtgtgtataaggtagttattggggaattgttagattgcttgttagatatcactgcactgtcggaactacagttaagtcggaagtttacatagacttaggttagagtcattaaaacgtgtttttcaaccactccacaaatttcttgttaacaaactatagttttggcaagtcggttaggtcatctactttgtgcatgacataagtcatttttccaacaattgtttacagacagattatttcacaaaaaaatcactgtatcacaattccagtgggtaagaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU297360 True 466 lncRNA 0.35 1 43981673 43982138

Neighbor

gene id symbol gene type direction distance location
LOC110519997 lct coding upstream 86025 43876264 ~ 43895648 (+)
LOC110519995 LOC106586118 coding upstream 105853 43857089 ~ 43875820 (+)
LOC110519994 LOC100380648 coding upstream 136044 43830961 ~ 43845629 (+)
LOC110519984 LOC106586113 coding upstream 467786 43169785 ~ 43513887 (+)
LOC110519989 LOC106581699 coding upstream 897913 43051602 ~ 43083760 (+)
LOC110504116 LOC106586120 coding downstream 93684 44075822 ~ 44208107 (+)
LOC110520002 LOC106586124 coding downstream 488033 44470171 ~ 44475272 (+)
LOC118964364 NA coding downstream 852373 44834511 ~ 44834565 (+)
cd18 cd18 coding downstream 896522 44878660 ~ 44903676 (+)
LOC110520005 LOC106586127 coding downstream 921896 44904034 ~ 44930884 (+)
G261382 NA non-coding upstream 93 43981255 ~ 43981580 (+)
G261381 NA non-coding upstream 597 43980813 ~ 43981076 (+)
G261380 NA non-coding upstream 952 43980445 ~ 43980721 (+)
G261338 NA non-coding upstream 28524 43921285 ~ 43953149 (+)
G261288 NA non-coding upstream 66389 43915055 ~ 43915284 (+)
G261386 LOC106581475 non-coding downstream 7700 43989838 ~ 44031605 (+)
G261725 NA non-coding downstream 243815 44225953 ~ 44226235 (+)
G261738 NA non-coding downstream 256120 44238258 ~ 44239058 (+)
G261739 NA non-coding downstream 257039 44239177 ~ 44239503 (+)
LOC110519969 LOC106586020 other upstream 3529493 40440040 ~ 40452542 (+)
LOC110519960 LOC106586058 other upstream 4313585 39658753 ~ 39668297 (+)
G254816 NA other upstream 5137117 38843510 ~ 38844556 (+)
G254445 NA other upstream 5380807 38600487 ~ 38600866 (+)
G254204 NA other upstream 5539939 38441166 ~ 38441734 (+)
G261749 NA other downstream 269931 44252069 ~ 44252551 (+)
G262037 NA other downstream 538281 44520419 ~ 44525408 (+)
G263547 LOC106586150 other downstream 1856783 45838921 ~ 45839480 (+)
G263710 NA other downstream 1951981 45934119 ~ 45934418 (+)
G263733 LOC106586158 other downstream 2093346 46075484 ~ 46079425 (+)

Expression


Co-expression Network