G267099


Basic Information

Item Value
gene id G267099
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 49283571 ~ 49285103 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU303503
tatatgtgttatttcatcgttttgatgtctttactattattctacaatttagaaaacggtaaaaatacattttttttaaaagaagaaaaacccttgaatgagtagctgcgtccaaacttttgaatggtactgtatatatattataatgtACTGAATATTGGTGCTGTGTGTTGTCTATGTAGTTATTAAGCCAGGGGCACTGTATGCAACACCACATTGTATCTATTTTCCCCTTTCATATTAAGTAGAGGGAATATAACACAGTCATTGTAACAGGTACTGTATTCTATTGCTGCGTTTTTAGAGCTAATACATTTTGTGGAGATTGTGTATAGTATTGTTACATTGCTTTTGTGGCAAATATATGTCCTAGTTTTTCAGTAACACATGTTCCAATGATTATACAAACCACTAAATAGAAGTATTTAATAGATTAACCACTTGATTTATATTGTTATCTATTCCATTTGTAATGTGTCCTTACTTGTATTTTGAAACGCTACTGTGTTTTGTATAAGCATATCAAAAGGTATTTTAGTGTATTTGTGAACCAAAGAAGGGTATacttacaaatatatataaataagtcCCTTAATATAACCAATAGATGGATTAAGATATTTATATACGAATATGTAAGTCAGTCACCCTTAACCTTAGTGCAATCTGTGTTGTGTAACTGTGATATGTCATTGTGAATCACATTGACTGAATGTTATAGTGTCACATGACTAGCTGTGGGAGGGAAGCTGAGCTCTGGCAGCAAATGTGCTGTTtctttagggctctattcaatctgtatcgctgaagcgGTACAGATTGCGCGATAGAAATTGAAAGGTAATTTCCCGTTGAGCCGACATGTGTAGAGTTTGCCGACATGTGTAGAGTTTGCCGTGAATACAGTCTCCACTATAATGCGGaaacgttgcctttaaattgaaaTCGCGCTGCAATGCTGCACTTCCACGATACGGATTCAATAAAGCCCTTATTTAGTGGGAAGCACAGTGATAAACCATCTGGGGAAATGTTTTATCGTAGGGACAAAGGATTGTTTGTATTTTAACAGTGATGCATTGACTGTTTTGAAGCATTTCACTTAACGAAGGGGGCCATTTAATTAAATATATAATCTTTCAAATCTATAAACTATGTCGTGGATTTGCTGGTCCTAATATGACCCGTGTGTGGACAATATTATCCCGTGAGAATCGACATGTTGCAAGAGACCAATTGTTTGTCATTGAGATGTTGACAAAACAAACGCACGGTCATGATGATGATTTTGCTTCTGTGATCAGATTGATTGAATTACATTCCTCGGTGAGTCGGATGGAGATCCCCTGTCACGGTAGCCACTTGAACCTCATACTAAGTGCAGAACATTACCGTCTTATTGACAGCACCAATAAAAATCTCAgctttaacaattttttggggggcatTTTTTTTTGCAGTTATTGTTAATGAGGTCCAATGATGATCTGTAATGAATAAATCTGTGGCTTTGAGTCCGGTCGACCAGTGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU303503 True 1533 lncRNA 0.36 1 49283571 49285103

Neighbor

gene id symbol gene type direction distance location
gad1a gad1 coding upstream 1607 49266948 ~ 49281964 (+)
LOC110520096 LOC106586217 coding upstream 25938 49255350 ~ 49257633 (+)
myo3b myo3b coding upstream 34319 49135871 ~ 49249252 (+)
ubr3 LOC100380624 coding upstream 149401 49088713 ~ 49134170 (+)
LOC110520093 LOC106586213 coding upstream 204316 49075093 ~ 49079255 (+)
LOC110520099 gors2 coding downstream 11059 49296162 ~ 49300776 (+)
dcaf17 dcaf17 coding downstream 72423 49357526 ~ 49364818 (+)
LOC110520104 LOC106586222 coding downstream 80839 49365942 ~ 49368341 (+)
dync1i2a LOC106586225 coding downstream 83659 49368762 ~ 49390595 (+)
hat1 hat1 coding downstream 128389 49413492 ~ 49430082 (+)
G267217 NA non-coding upstream 29357 49253953 ~ 49254214 (+)
G267214 NA non-coding upstream 32439 49250783 ~ 49251132 (+)
G267215 NA non-coding upstream 33957 49249433 ~ 49249614 (+)
G267190 NA non-coding upstream 78888 49204062 ~ 49204683 (+)
G267235 NA non-coding downstream 16165 49301268 ~ 49301555 (+)
G267259 NA non-coding downstream 48073 49333176 ~ 49385963 (+)
G267308 NA non-coding downstream 162422 49447525 ~ 49447786 (+)
G267309 NA non-coding downstream 163445 49448548 ~ 49448806 (+)
G267315 NA non-coding downstream 168625 49453728 ~ 49453950 (+)
LOC110520046 LOC106586167 other upstream 2451327 46801058 ~ 46832288 (+)
G263859 LOC107588258 other upstream 3098767 46184134 ~ 46184804 (+)
G263733 LOC106586158 other upstream 3204146 46075484 ~ 46079425 (+)
G263710 NA other upstream 3349153 45934119 ~ 45934418 (+)
G263547 LOC106586150 other upstream 3444091 45838921 ~ 45839480 (+)
G267358 NA other downstream 225700 49510803 ~ 49512475 (+)
G267381 NA other downstream 269395 49554498 ~ 49555838 (+)
G267529 NA other downstream 551514 49836617 ~ 49855502 (+)
hoxd3a hoxd3 other downstream 877198 50162278 ~ 50184327 (+)
LOC110520146 ino80d other downstream 1317199 50601983 ~ 50618761 (+)

Expression


Co-expression Network