G269436


Basic Information

Item Value
gene id G269436
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 51098811 ~ 51123995 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU306109
gaataattttgcacgcccaatttttcagtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttccacttcatgattgtgtcccacttgttgttgattcttcacaaaaaatacagttttatatctttatgtttgaagcctaaaatgtggcaaaaggtcgcaaagttcaagggggccgaatactttcgcaaggcactgtatatatatatatat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU306109 True 221 lncRNA 0.33 2 51098811 51123995

Neighbor

gene id symbol gene type direction distance location
LOC110520157 LOC106586094 coding upstream 139366 50958014 ~ 50959445 (+)
LOC110520146 ino80d coding upstream 480050 50601983 ~ 50618761 (+)
LOC110520148 LOC106586260 coding upstream 497156 50595616 ~ 50601655 (+)
gpr1 LOC106586257 coding upstream 506506 50588958 ~ 50592305 (+)
osbpl6 LOC106586252 coding upstream 578946 50455039 ~ 50519865 (+)
LOC110520162 LOC106586269 coding downstream 24549 51148544 ~ 51199761 (+)
LOC110520163 LOC106586270 coding downstream 104490 51228485 ~ 51230831 (+)
LOC110520164 LOC100137092 coding downstream 134797 51258792 ~ 51262216 (+)
LOC110520165 LOC106586271 coding downstream 143078 51267073 ~ 51276411 (+)
pdxka LOC106586273 coding downstream 366357 51490352 ~ 51500089 (+)
G269385 NA non-coding upstream 79252 51019344 ~ 51019559 (+)
G269378 NA non-coding upstream 87793 51010755 ~ 51011018 (+)
G269374 NA non-coding upstream 92258 51006242 ~ 51006553 (+)
G269366 NA non-coding upstream 102481 50996087 ~ 50996330 (+)
G269365 NA non-coding upstream 103773 50994611 ~ 50995038 (+)
G269444 NA non-coding downstream 12253 51136248 ~ 51136495 (+)
G270279 NA non-coding downstream 291487 51415482 ~ 51415683 (+)
G270288 NA non-coding downstream 297179 51421174 ~ 51421663 (+)
G270289 NA non-coding downstream 298038 51422033 ~ 51422325 (+)
G270335 NA non-coding downstream 347608 51471603 ~ 51472132 (+)
G269291 rap2a other upstream 198534 50898589 ~ 50900277 (+)
hoxd3a hoxd3 other upstream 915785 50162278 ~ 50184327 (+)
G267529 NA other upstream 1243309 49836617 ~ 49855502 (+)
G267381 NA other upstream 1542973 49554498 ~ 49555838 (+)
LOC110520169 il1rl1 other downstream 449985 51573980 ~ 51582567 (+)
acvr2aa LOC106586327 other downstream 2042957 53124656 ~ 53172428 (+)
LOC110520187 LOC106586325 other downstream 2097432 53174264 ~ 53235027 (+)
LOC110520190 LOC106586322 other downstream 2167335 53291284 ~ 53339392 (+)
G272965 NA other downstream 2524830 53648825 ~ 53652431 (+)

Expression


Co-expression Network