Gene
RNA
| Item | Value |
|---|---|
| gene id | G272837 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 53379410 ~ 53379650 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU309780 | True | 241 | lncRNA | 0.52 | 1 | 53379410 | 53379650 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520191 | LOC106586320 | coding | upstream | 3736 | 53347656 ~ 53375674 (+) |
| LOC110520190 | LOC106586322 | coding | upstream | 40018 | 53291284 ~ 53339392 (+) |
| kif5c | LOC106586321 | coding | upstream | 90430 | 53255416 ~ 53288980 (+) |
| LOC110520189 | LOC106586324 | coding | upstream | 125917 | 53235543 ~ 53253493 (+) |
| LOC110520187 | LOC106586325 | coding | upstream | 144383 | 53174264 ~ 53235027 (+) |
| LOC110520194 | LOC106586317 | coding | downstream | 56378 | 53436028 ~ 53449882 (+) |
| LOC110520196 | NA | coding | downstream | 220522 | 53600172 ~ 53629285 (+) |
| parp14rs3 | LOC106586314 | coding | downstream | 252119 | 53631769 ~ 53646425 (+) |
| LOC110520200 | LOC106586309 | coding | downstream | 485818 | 53865468 ~ 53869538 (+) |
| LOC110520202 | LOC106586307 | coding | downstream | 491100 | 53870750 ~ 53883922 (+) |
| G272308 | NA | non-coding | upstream | 162382 | 53216713 ~ 53217028 (+) |
| G272290 | NA | non-coding | upstream | 193633 | 53185564 ~ 53185777 (+) |
| G272283 | NA | non-coding | upstream | 206239 | 53172836 ~ 53173171 (+) |
| G272867 | NA | non-coding | downstream | 44220 | 53423870 ~ 53478570 (+) |
| G272982 | NA | non-coding | downstream | 207002 | 53586652 ~ 53586931 (+) |
| G272984 | NA | non-coding | downstream | 210015 | 53589665 ~ 53589865 (+) |
| G272988 | NA | non-coding | downstream | 217374 | 53597024 ~ 53597278 (+) |
| G272989 | NA | non-coding | downstream | 217689 | 53597339 ~ 53597620 (+) |
| acvr2aa | LOC106586327 | other | upstream | 206982 | 53124656 ~ 53172428 (+) |
| LOC110520169 | il1rl1 | other | upstream | 1800727 | 51573980 ~ 51582567 (+) |
| G269291 | rap2a | other | upstream | 2479133 | 50898589 ~ 50900277 (+) |
| G272965 | NA | other | downstream | 269175 | 53648825 ~ 53652431 (+) |
| G273004 | LOC106586313 | other | downstream | 277811 | 53657461 ~ 53658683 (+) |
| G273094 | LOC106586310 | other | downstream | 461614 | 53841264 ~ 53841617 (+) |
| G274592 | NA | other | downstream | 1494749 | 54874399 ~ 54875115 (+) |
| LOC110520231 | dbr1 | other | downstream | 1994896 | 55371759 ~ 55375526 (+) |
