Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU309780 |
| length | 241 |
| lncRNA type | inter_gene |
| GC content | 0.52 |
| exon number | 1 |
| gene id | G272837 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 53379410 ~ 53379650 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU309735 | lncRNA | upstream | 3894 | 53374200 ~ 53375516 (+) | True | LOC110520191 |
| TU309755 | lncRNA | upstream | 9028 | 53370169 ~ 53370382 (+) | False | LOC110520191 |
| TU309736 | lncRNA | upstream | 11679 | 53347685 ~ 53367731 (+) | False | LOC110520191 |
| TU309243 | lncRNA | upstream | 41824 | 53337155 ~ 53337586 (+) | True | LOC110520190 |
| TU309216 | lncRNA | upstream | 162382 | 53216713 ~ 53217028 (+) | True | G272308 |
| TU309811 | lncRNA | downstream | 44220 | 53423870 ~ 53478570 (+) | True | G272867 |
| TU309956 | lncRNA | downstream | 207002 | 53586652 ~ 53586931 (+) | True | G272982 |
| TU309958 | lncRNA | downstream | 210015 | 53589665 ~ 53589865 (+) | True | G272984 |
| TU309962 | lncRNA | downstream | 217374 | 53597024 ~ 53597278 (+) | True | G272988 |
| TU309963 | lncRNA | downstream | 217689 | 53597339 ~ 53597620 (+) | True | G272989 |
| XM_021597340.2 | mRNA | upstream | 3736 | 53347656 ~ 53375674 (+) | False | LOC110520191 |
| XM_021597341.2 | mRNA | upstream | 3736 | 53369984 ~ 53375674 (+) | False | LOC110520191 |
| XM_021597339.2 | mRNA | upstream | 40018 | 53291284 ~ 53339392 (+) | False | LOC110520190 |
| XM_036974575.1 | mRNA | upstream | 40019 | 53319295 ~ 53339391 (+) | False | LOC110520190 |
| XM_036974574.1 | mRNA | upstream | 90430 | 53255416 ~ 53288980 (+) | True | kif5c |
| XM_021597343.2 | mRNA | downstream | 56378 | 53436028 ~ 53449882 (+) | True | LOC110520194 |
| XM_021597345.2 | mRNA | downstream | 220522 | 53600172 ~ 53629285 (+) | True | LOC110520196 |
| XM_036974577.1 | mRNA | downstream | 252119 | 53631769 ~ 53644109 (+) | False | parp14rs3 |
| XM_021597347.2 | mRNA | downstream | 252124 | 53631774 ~ 53646425 (+) | False | parp14rs3 |
| XM_021597348.2 | mRNA | downstream | 252124 | 53631774 ~ 53646425 (+) | True | parp14rs3 |
| TU309244 | other | upstream | 42884 | 53291330 ~ 53336526 (+) | False | LOC110520190 |
| TU309190 | other | upstream | 156145 | 53221427 ~ 53223265 (+) | True | LOC110520187 |
| TU308945 | other | upstream | 206982 | 53166952 ~ 53172428 (+) | True | acvr2aa |
| TU307177 | other | upstream | 1800727 | 51573980 ~ 51578683 (+) | False | LOC110520169 |
| TU305958 | other | upstream | 2479133 | 50898589 ~ 50900277 (+) | True | G269291 |
| TU309921 | other | downstream | 269175 | 53648825 ~ 53652431 (+) | False | G272965 |
| TU309923 | other | downstream | 269175 | 53648825 ~ 53652152 (+) | True | G272965 |
| TU309978 | other | downstream | 277811 | 53657461 ~ 53658683 (+) | True | G273004 |
| TU310076 | other | downstream | 461614 | 53841264 ~ 53841617 (+) | True | G273094 |
| TU311754 | other | downstream | 1494749 | 54874399 ~ 54875115 (+) | False | G274592 |
