Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU309190 |
| length | 1165 |
| RNA type | TUCP |
| GC content | 0.56 |
| exon number | 2 |
| gene id | LOC110520187 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 53174264 ~ 53235027 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU309216 | lncRNA | upstream | 4399 | 53216713 ~ 53217028 (+) | True | G272308 |
| TU309196 | lncRNA | upstream | 35650 | 53185564 ~ 53185777 (+) | True | G272290 |
| TU309184 | lncRNA | upstream | 48256 | 53172836 ~ 53173171 (+) | True | G272283 |
| TU309159 | lncRNA | upstream | 101932 | 53119173 ~ 53119495 (+) | True | G272258 |
| TU309158 | lncRNA | upstream | 103062 | 53117965 ~ 53118365 (+) | True | G272257 |
| TU309243 | lncRNA | downstream | 113890 | 53337155 ~ 53337586 (+) | True | LOC110520190 |
| TU309736 | lncRNA | downstream | 124420 | 53347685 ~ 53367731 (+) | False | LOC110520191 |
| TU309755 | lncRNA | downstream | 146904 | 53370169 ~ 53370382 (+) | False | LOC110520191 |
| TU309735 | lncRNA | downstream | 150935 | 53374200 ~ 53375516 (+) | True | LOC110520191 |
| TU309780 | lncRNA | downstream | 156145 | 53379410 ~ 53379650 (+) | True | G272837 |
| XM_021597328.2 | mRNA | upstream | 49001 | 53124656 ~ 53172426 (+) | False | acvr2aa |
| XM_021597329.2 | mRNA | upstream | 49001 | 53124656 ~ 53172426 (+) | False | acvr2aa |
| XR_005049194.1 | mRNA | upstream | 278654 | 52874928 ~ 52942773 (+) | False | LOC110520185 |
| XM_021597316.2 | mRNA | upstream | 461051 | 52708371 ~ 52760376 (+) | False | LOC110520180 |
| XM_021597338.2 | mRNA | downstream | 12278 | 53235543 ~ 53251751 (+) | False | LOC110520189 |
| XM_021597335.2 | mRNA | downstream | 12278 | 53235543 ~ 53253493 (+) | False | LOC110520189 |
| XM_021597336.2 | mRNA | downstream | 12278 | 53235543 ~ 53253493 (+) | False | LOC110520189 |
| XM_021597337.2 | mRNA | downstream | 12278 | 53235543 ~ 53253493 (+) | True | LOC110520189 |
| XM_036974574.1 | mRNA | downstream | 32151 | 53255416 ~ 53288980 (+) | True | kif5c |
| TU308945 | other | upstream | 48999 | 53166952 ~ 53172428 (+) | True | acvr2aa |
| TU307177 | other | upstream | 1642744 | 51573980 ~ 51578683 (+) | False | LOC110520169 |
| TU305958 | other | upstream | 2321150 | 50898589 ~ 50900277 (+) | True | G269291 |
| TU305730 | other | upstream | 2616611 | 50602302 ~ 50604816 (+) | True | LOC110520146 |
| TU305367 | other | upstream | 3038401 | 50162301 ~ 50183026 (+) | True | hoxd3a |
| TU309244 | other | downstream | 68065 | 53291330 ~ 53336526 (+) | False | LOC110520190 |
| TU309921 | other | downstream | 425560 | 53648825 ~ 53652431 (+) | False | G272965 |
| TU309923 | other | downstream | 425560 | 53648825 ~ 53652152 (+) | True | G272965 |
| TU309978 | other | downstream | 434196 | 53657461 ~ 53658683 (+) | True | G273004 |
| TU310076 | other | downstream | 617999 | 53841264 ~ 53841617 (+) | True | G273094 |
