G272257


Basic Information

Item Value
gene id G272257
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 53117965 ~ 53118365 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU309158
CATAAACCCAAAGTCCAgagcagactatgggaggtgcacagtgctacatagagccatgactacatggaactctattccacatcaggtaactgatgcaagcagtagaatcagattttaaaaacataccttatggaacagtggggactgtgaagagacacacacacaggcacagacacatgttaacacacacacacacaccctacacacacgtacacatagatTTTGCATtgtagatacagtaccagtcaaaagtcacAACACACCTAGTCATTTTTCTtcatgtttactattttctacattgtataataatagtgaagattgGGTTGCGATGAGTTgtactgcagagtgaaggaaaagcagccaacaagtgctcagcatatgtgggaactccttcaagactg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU309158 True 401 lncRNA 0.42 1 53117965 53118365

Neighbor

gene id symbol gene type direction distance location
LOC110520185 NA coding upstream 175192 52874928 ~ 52942773 (+)
LOC110520180 LOC106586330 coding upstream 357589 52708371 ~ 52760376 (+)
LOC110520179 arl4c coding upstream 530917 52585011 ~ 52587048 (+)
LOC110520178 LOC106582420 coding upstream 550674 52508775 ~ 52567291 (+)
LOC110520177 LOC106586282 coding upstream 675356 52380931 ~ 52442609 (+)
acvr2aa LOC106586327 coding downstream 6291 53124656 ~ 53172428 (+)
LOC110520187 LOC106586325 coding downstream 55899 53174264 ~ 53235027 (+)
LOC110520189 LOC106586324 coding downstream 117178 53235543 ~ 53253493 (+)
kif5c LOC106586321 coding downstream 137051 53255416 ~ 53288980 (+)
LOC110520190 LOC106586322 coding downstream 172919 53291284 ~ 53339392 (+)
G272256 NA non-coding upstream 503 53117228 ~ 53117462 (+)
G272185 NA non-coding upstream 101689 53015850 ~ 53016276 (+)
G272158 NA non-coding upstream 138820 52978940 ~ 52979145 (+)
G272135 NA non-coding upstream 168752 52948997 ~ 52949213 (+)
G272119 NA non-coding upstream 187017 52930638 ~ 52930948 (+)
G272258 NA non-coding downstream 808 53119173 ~ 53119495 (+)
G272283 NA non-coding downstream 54471 53172836 ~ 53173171 (+)
G272290 NA non-coding downstream 67199 53185564 ~ 53185777 (+)
G272308 NA non-coding downstream 98348 53216713 ~ 53217028 (+)
LOC110520169 il1rl1 other upstream 1539282 51573980 ~ 51582567 (+)
G269291 rap2a other upstream 2217688 50898589 ~ 50900277 (+)
LOC110520146 ino80d other upstream 2513149 50601983 ~ 50618761 (+)
hoxd3a hoxd3 other upstream 2934939 50162278 ~ 50184327 (+)
G267529 NA other upstream 3262463 49836617 ~ 49855502 (+)
G272965 NA other downstream 530460 53648825 ~ 53652431 (+)
G273004 LOC106586313 other downstream 539096 53657461 ~ 53658683 (+)

Expression


Co-expression Network