XLOC_022255 (dre-mir-135c-2)


Basic Information

Item Value
gene id XLOC_022255
gene name dre-mir-135c-2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 18063173 ~ 18063299 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00043939
TGCAGTCTAAAGCAACTCAAAACACTACTGTGCTTTATGGCTTTCTATTCCTATGTGATTTTGATATGATGTATCATGTAGGGTTCAAAGCCATTAGGTACAGAGTGGCTTATCAGCAGTGGATGTA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000080573

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00043939 True 127 miRNA 0.39 1 18063173 18063299

Neighbor

gene id symbol gene type direction distance location
XLOC_022254 zgc:92287 coding downstream 5215 18032569 ~ 18057958 (-)
XLOC_022253 pm20d1.1 coding downstream 32774 18020928 ~ 18030399 (-)
XLOC_022252 pm20d1.2 coding downstream 45227 17993791 ~ 18017946 (-)
XLOC_022251 NA coding downstream 177322 17881023 ~ 17885851 (-)
XLOC_022250 tfip11 coding downstream 197073 17847040 ~ 17866100 (-)
XLOC_022256 NA coding upstream 10416 18073715 ~ 18074419 (-)
XLOC_022257 nucks1b coding upstream 55236 18118535 ~ 18130264 (-)
XLOC_022258 tafa1a coding upstream 113982 18177281 ~ 18287618 (-)
XLOC_022259 hsd17b10 coding upstream 308749 18372048 ~ 18381361 (-)
XLOC_022260 NA coding upstream 318998 18382297 ~ 18385168 (-)
XLOC_022247 NA non-coding downstream 223975 17657994 ~ 17839198 (-)
XLOC_022248 CU570795.1 non-coding downstream 380241 17682818 ~ 17682932 (-)
XLOC_022241 BX649300.1 non-coding downstream 707471 17354153 ~ 17355702 (-)
XLOC_022240 BX927275.3 non-coding downstream 886955 17176104 ~ 17176218 (-)
XLOC_022261 NA non-coding upstream 323488 18386787 ~ 18415872 (-)
XLOC_022266 CT027756.2 non-coding upstream 546717 18610016 ~ 18611010 (-)
XLOC_022267 CT027756.1 non-coding upstream 547828 18611127 ~ 18612421 (-)

Expression


Co-expression Network