G291354


Basic Information

Item Value
gene id G291354
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 69740980 ~ 69741802 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU330362
gtttatccccgttttgttccgtttgctccCTTTTAAGAGAAGTTTTTAAACAGAATTGGCAgattgtcagatttaaaaaaggatttactgcgaaagaatacgatgcgattatctgaggatagagccccataaaaaacaactatttcaaccagcacaggcgtaacaaaatcacaaactgcaataaaataaattgtttacctttgacgatcttcctctgtttgcaatcccaatgctcattgttacacaatgaatggtcttttgtttgataaaatcaatttttgtAGCCTAACaggaaacattttgtgaaccgcttgtgccgtgaattccgtctcattccattttcgacgacacatttgatgtaaatacacacacgaaacgtgacttttccagtcatgtttggtttcattgcaatcaactggtttgtttgtaacacaaccaaacctgatgggtcatttcgcgggacgtattgactgaaagaaaccgatttgaagacaacaagtaatgacatcattgtgcaccaatgatatgaccgctgtttcgttgattgactgtattttaacccaatgaccactgatcgtcttgaaatctagctgggtagatagccaatgagctgaggtaaacggcaatatgtaatgtttatgtgttggaagaccaacccatgtagtaaactccggcgtagAGGTTCAGTCGCCATTGAcgattcataccggaaggagcaacgcatgttgcgcacagcattgttttgataaagcgcatattcagctgttcatatatcaatcagtatggcgactaagtcagggaaagctaaatctaagtctagata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU330362 True 823 lncRNA 0.39 1 69740980 69741802

Neighbor

gene id symbol gene type direction distance location
LOC110504569 rpgr coding upstream 9323 69712348 ~ 69731657 (+)
LOC118964360 NA coding upstream 64317 69676510 ~ 69676663 (+)
LOC110520479 LOC106586674 coding upstream 100257 69634580 ~ 69640723 (+)
LOC110520478 LOC106586673 coding upstream 105677 69625755 ~ 69635303 (+)
LOC110520475 LOC106586671 coding upstream 145182 69469776 ~ 69595798 (+)
LOC110520485 dynlt3 coding downstream 120092 69861894 ~ 69870212 (+)
LOC110504602 LOC106586683 coding downstream 174008 69915810 ~ 69923807 (+)
LOC110520491 LOC106586687 coding downstream 238466 69980268 ~ 70034765 (+)
LOC110520493 LOC106586690 coding downstream 315581 70057383 ~ 70070470 (+)
LOC110520495 LOC106586691 coding downstream 331002 70072804 ~ 70092807 (+)
G291353 NA non-coding upstream 46 69740538 ~ 69740934 (+)
G291345 NA non-coding upstream 20194 69720008 ~ 69720786 (+)
G291331 NA non-coding upstream 39260 69699748 ~ 69701720 (+)
G291326 NA non-coding upstream 46731 69694015 ~ 69694249 (+)
G291163 NA non-coding upstream 98950 69563664 ~ 69642030 (+)
G291356 NA non-coding downstream 2442 69744244 ~ 69744512 (+)
G291357 NA non-coding downstream 3389 69745191 ~ 69745409 (+)
G291362 NA non-coding downstream 11037 69752839 ~ 69753077 (+)
G291365 NA non-coding downstream 15413 69757215 ~ 69757418 (+)
G291368 NA non-coding downstream 18084 69759886 ~ 69760113 (+)
G291327 NA other upstream 45144 69695395 ~ 69695836 (+)
G289883 NA other upstream 1515674 68223725 ~ 68225306 (+)
G289517 NA other upstream 1978557 67761737 ~ 67762423 (+)
G289486 NA other upstream 2058858 67678862 ~ 67682122 (+)
G291461 NA other downstream 207865 69949667 ~ 69952168 (+)
LOC110520507 senp7 other downstream 835316 70576887 ~ 70597458 (+)

Expression


Co-expression Network