G291378


Basic Information

Item Value
gene id G291378
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 69870856 ~ 69871336 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU330389
TGATTGCAGCCCTGCTTTAAGCATTTTGTTGATTACAATGAGGTAATCACTCATTGTAGAAGTGAAAGCTGTTTCTATACTATTCTGTTCACCAAGCAAAGCAGATCAATTACTTCAACGATGGAGAGTCGGAGAAATGGAACTTGTAAAGAATTTGATCCCAGCCTAACAAACTAGAGGAATATTGGCTGGATTCCATTGTCAAAACTTGCTACCGCTCCTTGTTTTGGGGGGTATCAGTACATTTGATATTTTttgcaacttttacttcactatattccaAAGAAAGTAATTTACTTTTCactcatacattttccctgacacacaaaagtacttgagcttagcaggacaggaaaatggtccaattcacacacttgtcaagagaacatgcctggccatccctactgcctcttatctggaggacttactgaacacaaatgctttgtttgtgaattatgtctgagtgttagaatgtgcccct

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU330389 True 481 lncRNA 0.39 1 69870856 69871336

Neighbor

gene id symbol gene type direction distance location
LOC110520485 dynlt3 coding upstream 644 69861894 ~ 69870212 (+)
LOC110504579 LOC106582139 coding upstream 101210 69731759 ~ 69769646 (+)
LOC110504569 rpgr coding upstream 139199 69712348 ~ 69731657 (+)
LOC118964360 NA coding upstream 194193 69676510 ~ 69676663 (+)
LOC110520479 LOC106586674 coding upstream 230133 69634580 ~ 69640723 (+)
LOC110504602 LOC106586683 coding downstream 44474 69915810 ~ 69923807 (+)
LOC110520491 LOC106586687 coding downstream 108932 69980268 ~ 70034765 (+)
LOC110520493 LOC106586690 coding downstream 186047 70057383 ~ 70070470 (+)
LOC110520495 LOC106586691 coding downstream 201468 70072804 ~ 70092807 (+)
LOC110518747 LOC106586693 coding downstream 360219 70231555 ~ 70314000 (+)
G291414 NA non-coding upstream 32931 69837711 ~ 69837925 (+)
G291411 NA non-coding upstream 37801 69832750 ~ 69833055 (+)
G291403 NA non-coding upstream 52879 69817578 ~ 69817977 (+)
G291404 sytl5 non-coding upstream 56488 69814140 ~ 69814368 (+)
G291402 NA non-coding upstream 56784 69813580 ~ 69814072 (+)
G291376 NA non-coding downstream 357 69871693 ~ 69946132 (+)
G291440 NA non-coding downstream 16475 69887811 ~ 69888217 (+)
G291444 NA non-coding downstream 22519 69893855 ~ 69894931 (+)
G291490 NA non-coding downstream 100362 69971698 ~ 69971933 (+)
G291327 NA other upstream 175020 69695395 ~ 69695836 (+)
LOC110520478 LOC106586673 other upstream 240487 69625755 ~ 69635303 (+)
G289883 NA other upstream 1645550 68223725 ~ 68225306 (+)
G289517 NA other upstream 2108433 67761737 ~ 67762423 (+)
G291461 NA other downstream 78331 69949667 ~ 69952168 (+)
LOC110520507 senp7 other downstream 705782 70576887 ~ 70597458 (+)
G293204 NA other downstream 1494847 71366183 ~ 71366423 (+)

Expression


Co-expression Network