XLOC_022444 (zgc:194189)


Basic Information

Item Value
gene id XLOC_022444
gene name zgc:194189
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 29823286 ~ 29824146 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044271
CTTTCCACCTGTACCGTGCGCCACAGAGGATCTTCGCGTTTCATTCATCCAGCTCGATGGATCTGTGCGCGGGCTCAGTGGACCTGCAGTGCCGTGATGCCGCTGTAGAGGACTGCTCGGAGACCGCAGGGTGCCCAGGAGCTGCTCCAGCACCAGAAAAACCTCCTTATTCGTACGTGGCTCTCATCGCTATGGCCATCAGAGAAAGCGAGGACAAGAAGCTGACTCTGAATGACATCTACAGCTACATCATATCCAAGTTCCCATACTACGAGAAGAACAAAAAGGGATGGCAGAACAGCATCAGACACAATCTGAGCCTGAACGAGTGTTTCGTGAAGATCCCGCGGGAGAGCGGAGGCGAGAGGAAGGGGAACTTTTGGACACTGGATCCGGCGTTTAATGACATGTTCGAAAAGGGCAATTATAGACGCAGGAGACGCGTCAAGAGACCTTACCGGCCTGCAGCATTACCATCTGGATATAATTTTGCCGACCCGTACTGTCTGCAGCAGGAACCTGTTTATTGGCAAAGCCCGTTCGTCAGCAGCGGCTCGTGGAGTCACCAGTCCGGCTCTCCCACGCACATCTCCAGCTACATGCTCGGCAACGCGCGCCCTCTGTCTCCGAACGACTTCGCCAATTCTCCGGTCAGCTATTATCACGGTCACCACCCTCATTTTCACCCGTCCTACAGACCGTACCACCGGCATCCAAACGCTCTAGTGCCTCTGAGCGGCATGACTCCGCCGGTGAGCCCGGGCGGAAGCTCCATCTCCACCTGCAGTTACGCGCCGCAGAACAGTCACCCTGAACTGGTGCACCATCAGTTTGACTAATGGCAAACCTcggtgctgactg

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000008010

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044271 True 861 mRNA 0.56 1 29823286 29824146

Neighbor

gene id symbol gene type direction distance location
XLOC_022443 NA coding downstream 721 29821201 ~ 29822565 (-)
XLOC_022442 pik3cd coding downstream 10619 29756603 ~ 29812667 (-)
XLOC_022441 ctnnbip1 coding downstream 71556 29711569 ~ 29751730 (-)
XLOC_022440 NA coding downstream 116927 29674995 ~ 29706359 (-)
XLOC_022439 clstn1 coding downstream 155000 29580584 ~ 29668286 (-)
XLOC_022445 tmem201 coding upstream 2988 29827134 ~ 29858087 (-)
XLOC_022446 FP101914.1 coding upstream 17065 29841211 ~ 29844314 (-)
XLOC_022447 slc25a33 coding upstream 37097 29861243 ~ 29878643 (-)
XLOC_022448 CU695073.1 coding upstream 76505 29900651 ~ 29901235 (-)
XLOC_022449 NA coding upstream 185117 30009263 ~ 30010819 (-)
XLOC_022433 NA non-coding downstream 465072 29333853 ~ 29358214 (-)
XLOC_022432 CR677617.1 non-coding downstream 565570 29185852 ~ 29257716 (-)
XLOC_022427 NA non-coding downstream 1369583 28433175 ~ 28453703 (-)
XLOC_022451 NA non-coding upstream 230288 30054434 ~ 30059176 (-)
XLOC_022453 CR456642.2 non-coding upstream 693053 30517199 ~ 30698687 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000001_11953793_11954834 FOXL2 coding CI01000001 null 11953552 ~ 11955605 (-)
tiger barb (Puntius tetrazona) G155927 zgc:194189,LOC107570831,LOC107708788,LOC107681978,LOC107695725,LOC107586555,LOC107718823 unknown NC_056721.1 CM032090.1 9120884 ~ 9122393 (+)
mexican tetra (Astyanax mexicanus) G170603 NA non-coding NC_035915.1 CM008318.1 27862156 ~ 27862552 (-)