XLOC_022447 (slc25a33)


Basic Information

Item Value
gene id XLOC_022447
gene name slc25a33
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 29861243 ~ 29878643 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044274
GCCGGTAGTTGAGCATCATCAGGCCGTCGGCCTCTGTGACTActcttttatttaacatattgcGAGGAACAATGGTTCTCTGAAATGGCGCAGAAAGACACGCTGTTACATCTCTTTGCAGGGGGaTGTGGTGGAACAGTAGGTGCCATCATGACATGCCCCCTCGAGGTGTTAAAAACTAGGCTTCAGTCATCTGGCCTCACTCTCAGGCCGGTTTTCCAGGTTCAGCTGGGCACACTCAATGGTGCTGGTGTCATTAGACCGGGATCCGTCACTCCTGGTTTACTACAGGTGTTACGGTCAATTCTAGAAAAAGAGGGACCAAGGTCTTTATTCAGAGGGTTGGGTCCAAATCTCGTTGGTGTTGCACCTTCAAGGGCAATTTATTTCGCAGCTTATTCAAAGTCAAAAGAAACTTTCAATGGCATCTTTGTGCCTAACAGCGGAGTCGTCCACATGTCCTCAGCAGGCTTTGCAGctttcatcACAAACTCCCTGATGAATCCCATCTGGATGGTCAAAACAAGAATGCAGCTAGAGAAGAAagcaCGTGGggagaagaaaatgaatgcattgcAATGCGCACGGTATGTGTACAAGACGGAGGGAATGAGAGGTTTCTACCGGGGCCTGACGGCATCGTACGCTGGGATCTCGGAGACCATGATCTGCTTCCTCATCTACGAGACGCTGAAGAAATACCTGGCGCAGAGTCGATTCACCACGCCTGACACGGACAATGATAAAGGGGCCTCAGATTTCCTGGGCCTCATGTTTGCTGCTGCATTTGCCAAGGGTTGCGCGTCCTGCATAGCTTATCCACATGAGGTCATTCGGACAAGACTCAGAGAAGAAGGCAGCAAATACAAGTACTTCTTTCAGACGGCGCGTCTTGTGGCAGTAGAAGAGGGTTACGCTGCATTTTACAGGGGACTCATTCCACAGCTCATCAGACAGATCCCCAACACAGCTATAGTGCTGTCCACATACGAGCTGATCGTCCATCTGCTAGCCGAACCCTCCAAATAAAGCACAAAGACACTAAAACCTGCAGCTCGAGTGGACGTGAATGTTCATTAAAATCACCCAAAGACATtcagtagcttttttttttttaaagaagaagaaTGCCTGTTATCAGAACTGTTTTGCTCGTTGTGTGTTATGTAAATGGCGCATATCGCATAGCTGTTTATGTATGCTGTATCAGTGTACAGATAAAGGTCATCTGAATATACAAATAGTGCATTTAAGTTaactaaattattgttattatgagtAGCATTTTGTTTGCGGTCATTTGCAATTCTTTGGATCTATGAAGATGATATGGTACTTGCTGATGGAGTTTTGCGAGTTAATCATTAATGGATCcgggttttattattattattattattattattttcttggaAGGAAAGGAGATGATATTGAAATGGCTTTCTAGGCGCTCACGGTTATGTTGCAATATTTTGTAATACCTGTTTTGTGACACCTTGTAGCATTTGGGAGTCTGACCAATTAATTCTATTCACCTCTGCTAGAAACGTTTCATCCGTTTACTGTATATTTGGCTGTACAGAAAAGAAGGGCTTCAATGCGTATGCTGCTGTTGGTTTAatataaattatcattttttttcttgttgaaaaTGCATAGTTTAAACAGAAATGAGCCACTTCAATAAATGCATCTTTTTCAA

Function

symbol description
slc25a33 Predicted to enable pyrimidine nucleotide transmembrane transporter activity. Predicted to be involved in pyrimidine nucleotide import into mitochondrion. Predicted to act upstream of or within transmembrane transport. Predicted to be located in mitochondrial inner membrane. Predicted to be integral component of membrane. Is expressed in margin; myotome; and pharyngeal arch 3-7 skeleton. Orthologous to human SLC25A33 (solute carrier family 25 member 33).

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:1990519 pyrimidine nucleotide import into mitochondrion biological_process
GO:0005743 mitochondrial inner membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005739 mitochondrion cellular_component
GO:0015218 pyrimidine nucleotide transmembrane transporter activity molecular_function
GO:0005347 ATP transmembrane transporter activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040426-2183 Predicted to enable pyrimidine nucleotide transmembrane transporter activity. Predicted to be involved in pyrimidine nucleotide import into mitochondrion. Predicted to act upstream of or within transmembrane transport. Predicted to be located in mitochondrial inner membrane. Predicted to be integral component of membrane. Is expressed in margin; myotome; and pharyngeal arch 3-7 skeleton. Orthologous to human SLC25A33 (solute carrier family 25 member 33).

Ensembl:

ensembl_id ENSDARG00000039931

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044274 True 1702 mRNA 0.43 7 29861243 29878643

Neighbor

gene id symbol gene type direction distance location
XLOC_022445 tmem201 coding downstream 3156 29827134 ~ 29858087 (-)
XLOC_022446 FP101914.1 coding downstream 16929 29841211 ~ 29844314 (-)
XLOC_022444 zgc:194189 coding downstream 37097 29823286 ~ 29824146 (-)
XLOC_022443 NA coding downstream 38678 29821201 ~ 29822565 (-)
XLOC_022442 pik3cd coding downstream 48576 29756603 ~ 29812667 (-)
XLOC_022448 CU695073.1 coding upstream 22008 29900651 ~ 29901235 (-)
XLOC_022449 NA coding upstream 130620 30009263 ~ 30010819 (-)
XLOC_022450 ccdc187 coding upstream 134597 30013240 ~ 30045733 (-)
XLOC_022451 NA coding upstream 175791 30054434 ~ 30059176 (-)
XLOC_022452 camta1a coding upstream 182721 30061364 ~ 30431333 (-)
XLOC_022440 NA non-coding downstream 154884 29674995 ~ 29706359 (-)
XLOC_022433 NA non-coding downstream 503029 29333853 ~ 29358214 (-)
XLOC_022432 CR677617.1 non-coding downstream 603527 29185852 ~ 29257716 (-)
XLOC_022453 CR456642.2 non-coding upstream 638556 30517199 ~ 30698687 (-)
XLOC_022454 CR456642.1 non-coding upstream 729340 30607983 ~ 30608101 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000001_11973849_11984738 S2533, SLC25A33 coding CI01000001 null 11973173 ~ 11985134 (-)