XLOC_022520 (cmtr1)


Basic Information

Item Value
gene id XLOC_022520
gene name cmtr1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 35361724 ~ 35396978 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044413
tgatttgttttttttttttctttccctcctTCTTTTTTGTCACTTCGTTTAAACATGTTCTGTCATCAACTAGCGTGAACTTTCAGGCGCTTGTTGTGTAACCCCGCATGTGACGTCATCAACATGCACCAGCAGTACGGTAAGACCCACTGAGAGTGGAACGCGGGCCAGACTTGACATTTGAAAAGAAAACTTAAAGCAGAAACCGTGAAGAAACTGTGCAGATTGGATACAAATATGAGAGTACAGTTCGGAGGCGACTCAGGATAATAGCTGCATATTTTCTTTTAGGATTTGTGACCCATTGGATTAAACATGAAGAGAGCAGCACAAGCATCAGACGAGCCTCTGAAGAAGAGGAAGACGGCCCGTGAGGAATCGTCCGATGAAGATGAGGAGTCTTCTCAAAGAACCACCAGTCAGGACTCGAGTCAGAGTGAATCTCTCAGTGATGTTGAGGATCATAAACCCAGTTTCTCCAGGCCATCTGATTCCCAAAATTCTCAAGGCAGCATGGCCCATAATGAAGCCTCTAACAAATTTGCGATGTACAATAATGTCTCTCAGAAACTCATGGCCAAAATGGGTTTCCGAGAAGGCGAGGGTTTGGGAAAGTATGGTCAGGGCCGGAAGGAGATTGTGGAAGCGTCGACTCAGCGTGGGCGCCGGGGTTTGGGTCTGATGCTGAAGGGCTTTCAGGGTGACCTAAATGTAGACTGGGAAGATGAGCCGGAGCCGAGTGCTATAGAACAGGTGTCGTGGTTTCCAGAAAGTTCTCCAGAGATCCCAGATTCGGATGAGCTGAGGGATTGGATGACCATTGGAGAGaaaaaattaaaaattgacgATGAAATCGAGTTTTGCTCAGAGAATCTGCTGCATCTCCTTCTCCGCTGTAAAACTGTGTTTGATGACTTGGAAGGTGAGGAGATGAGGCGAGCGCGCACTCGATCAAACCCGTATGAAACCATCCGAGGGGCTTTTTTTcttaacagAGCTGCTATGAAGATGGCGAACATGGATCATGTTTTTGACTATATGTTCACCAACCCAAAAGACTCTCAAGGGaaagtCCTGACGCGTGATAAAGAGGGTGAATTGCTGTATTTCGGAGACGTTTGCGCAGGACCGGGAGGATTCTCGGAGTATGTGTTGTGGCGACGGCGCTGGCATGCTAAAGGTTTTGGGATGACACTTAAAGGAGCAAATGATTTCAAGCTGGAAGATTTCTATGCTGCACCTAGTGAGCTCTTTGAGGCCTATTACGGTGAGGGTGGGATCGATGGCGATGGTGACATCACACGGCCCGAGAACATCAGTGCGTTTCGTAATTTTGTCTTGGACAGCACTGAGGGCCGGGGCCTGCACTTCTTAATGGCGGATGGGGGCTTTTCTGTGGAGGGACAAGAAAACCTTCAGGAGATTCTGAGCAAGCAACTGCTCCTGTGTCAATTTCTTACCGCCCTGTCTGTCGTCAGACCAGGAGGCCATTTTTTGTGCAAGACGTTTGACTTGTTCACTCCGTTCAGCGTGGGCTTGATTTATCTGCTGTACCTCTGCTTCGAGAGGGTCTCGCTCTTCAAACCCGTCACCAGTCGGCCTGCCAATTCAGAGAGGTACGTGGTGTGCAAGGGTTTAAAACCAGGCACGGATGCCGTCAGAGAATACATGTTCACCATCAACCTGAAGCTGAATCAGTTCAGACACTCAGACAGAGACGTTATTGAAGTCGTCCCTCTGGACATCATTAAAGGAGACACTGACTTCTTCCAATACATGATCGGCTCCAATGAAAGCTATTGTGCGGTTCAGATCAAAGCTCTGGCGAAGATCCACGCGTACGTCAGAGATACGACGCTGTTTGAGGCCAGGCAAGCAGACATACGCAAAGAATGCTTGAAATTGTGGGGGGGTTCAGAAATGGACAGTTTTAACTCCAGACCTACTGCACTGAACTCTGTAAATCTGGAGAAACTACAGCACGTGCTGGACTACAGGTGCATTGTGGGAGGTGGAGAACAGCTTTTTCTCCTGGCACTTGGGAGATCTCAGATTTACACGTGGGACGGTAAAGCCCCTTCACGGTGGAAGAAACTGGAGAACTTCAAAATGGAGCTTCCCAGAGACACATTGCTGAGCGTAGAGATCGTCCAGGAGCTGAAGGGAGAGGGAAAAGCCCAGCGAAGGATCAACGCTGTGCATGTTCTCGATGCTCTTGTTCTCAACGGCACTGACGTCAGAGATCAGCACTTCAACCAGAGaaTCCAGATGGTGGAGAAGTTTGTGAAAGCCGTGTCCAAACCCAGCAGGCCCGACATGAACCCGATCCGAGTGAAGGAAGTCTATAGGTTGGAGGAGATGGAGAAAATCTTTGTGAGGTTGGAAATGAAGATAACCAAAAGTTCAGGAGGGATGCCGAGACTATCGTACACAGGCAGAGATGATCGTCACTTCCTCCCGACCGGCCTTTACATCATCAAAACAGTGAATGACCCATGGACAATGGCTTTCAGCAAAAGTTCTAAAAGAAAGTTTTTCTACAACAAGCAGACCAAAGAATCCACTTACGATCTGCCAGCCACTTCTGTGGCACCTTTCCACGTGTGTCATCAAGACAGGCTGTTTTGGGCTTGGGAGGAAGGCGTCCGAGTTCACGACTCCCAGACGAGGATCAACCCTGACAAGCTCTCCAAAGATGATGTGGTTTCCTTCATCCATAAGCACTATCAACAAtaaccacacacatgcacacacaaagtaACAGACTGTTCATTCTCCTGTCCACCAGGAGGCACTGTAGCTTTCAAAACAGTCCAGCATTCTGCTCAGTTTCTACACACTTCAGGGCTTCAGAAATAGACAGCAGTGTGTATCTGCATGTGTCTGGCATTTCTAGAGGAGAAACTTAGATCACACTGCTTTTCGCTTGTTGGTGTGTTTTTCTCCTGAACTTCAACCCCCCTCCACCCCACGCCCCTGATTCCTCGTATGAATTTTTCCTCTGCTAAACCGTTCGATTTTTAGATCCATCCCGTCAGTGCGATAACCGCGTTTAACAAAAGCGCATGGCGGTTAGCATTGGCTCTACTGTGTTGCATGTGTCGCCTTGCGCTCTTCATTTtggtttgtatttcttttttcagTGTTTACAAATATTAGACTGACTGTTCTGAGGGGAAAACATGTCGATTTTAAGACTATTCGTGATCATGGTTGTATTAAAATCATGGAGGAAGAATATTCCATGTTGGTCCCGCTTTGTTATTCTTCTCGAAtggttttacatttttgtttggtTTAATGGAAGATTGAAAATAGAAAAAGGACAGAGACAAATGTTTAGCAATATTTTCATTAGTATTTATATAATTctgttattatattacattatattaggggcgaagcagtggcgcagtaggtagtgctgtcgcctcacagctaataggtcgctgggtcgagctcagttggcgtttctgtgtggagtttgcatgttctccctgcgttcgcgtgggttttctccaggtgctccggtttcccgcacagtccaaagacatgcggtacaggtgaattgggtaagctaaattgggtaaggtaaattgtccatagtgtataagtgtgtgtgtgtgtgtgaatgtgtgtggatgtttcccagagatgggttgcagctggaagggcattcactgcgtaaaaacttgctgtataagttggcagttcattccgctgtggcgaccccggattaataaagggactaagccgacaagaaaatgaatgaatgaatattacattaGATAAGATCAGATTAGATTAAACGCCCTTTACtggattaaataatttttatggagacaaattgtgtataaatgtttttattagtatttttaaatattattatattaaattatattgtattatatcatattatattatattatattataggccatttcaatgtggtcatgtcattggtccATAGACATTTCCTGCTTGTAGGCAAACTGTTTCATAACTTTAGCATGAggaaattcaatcataacttagttaaaacagctgtcataatattatttatcaatatgtggctctttttggattctcggaagctattgaaattaaaaatgtaaaataggaaATGCGTTGAGACCATTGTTTTTTGTATACATCCCTCAAGATGTTCTATAATAAACGCCTTCTGCTGGATTAAATATTTTTCATGGAGacaaattgttaataaatattgttattagtGTTTATGTAATTGAGTCtgatattatgttatgttatattattgttatattaaataGC
>TCONS_00044412
tgatttgttttttttttttctttccctcctTCTTTTTTGTCACTTCGTTTAAACATGTTCTGTCATCAACTAGCGTGAACTTTCAGGCGCTTGTTGTGTAACCCCGCATGTGACGTCATCAACATGCACCAGCAGTACGGTAAGACCCACTGAGAGTGGAACGCGGGCCAGACTTGACATTTGAAAAGAAAACTTAAAGCAGAAACCGTGAAGAAACTGTGCAGATTGGATACAAATATGAGAGTACAGTTCGGAGGCGACTCAGGATAATAGCTGCATATTTTCTTTTAGGATTTGTGACCCATTGGATTAAACATGAAGAGAGCAGCACAAGCATCAGACGAGCCTCTGAAGAAGAGGAAGACGGCCCGTGAGGAATCGTCCGATGAAGATGAGGAGTCTTCTCAAAGAACCACCAGTCAGGACTCGAGTCAGAGTGAATCTCTCAGTGATGTTGAGGATCATAAACCCAGTTTCTCCAGGCCATCTGATTCCCAAAATTCTCAAGGCAGCATGGCCCATAATGAAGCCTCTAACAAATTTGCGATGTACAATAATGTCTCTCAGAAACTCATGGCCAAAATGGGTTTCCGAGAAGGCGAGGGTTTGGGAAAGTATGGTCAGGGCCGGAAGGAGATTGTGGAAGCGTCGACTCAGCGTGGGCGCCGGGGTTTGGGTCTGATGCTGAAGGGCTTTCAGGGTGACCTAAATGTAGACTGGGAAGATGAGCCGGAGCCGAGTGCTATAGAACAGGTGTCGTGGTTTCCAGAAAGTTCTCCAGAGATCCCAGATTCGGATGAGCTGAGGGATTGGATGACCATTGGAGAGaaaaaattaaaaattgacgATGAAATCGAGTTTTGCTCAGAGAATCTGCTGCATCTCCTTCTCCGCTGTAAAACTGTGTTTGATGACTTGGAAGGTGAGGAGATGAGGCGAGCGCGCACTCGATCAAACCCGTATGAAACCATCCGAGGGGCTTTTTTTcttaacagAGCTGCTATGAAGATGGCGAACATGGATCATGTTTTTGACTATATGTTCACCAACCCAAAAGACTCTCAAGGGaaagtCCTGACGCGTGATAAAGAGGGTGAATTGCTGTATTTCGGAGACGTTTGCGCAGGACCGGGAGGATTCTCGGAGTATGTGTTGTGGCGACGGCGCTGGCATGCTAAAGGTTTTGGGATGACACTTAAAGGAGCAAATGATTTCAAGCTGGAAGATTTCTATGCTGCACCTAGTGAGCTCTTTGAGGCCTATTACGGTGAGGGTGGGATCGATGGCGATGGTGACATCACACGGCCCGAGAACATCAGTGCGTTTCGTAATTTTGTCTTGGACAGCACTGAGGGCCGGGGCCTGCACTTCTTAATGGCGGATGGGGGCTTTTCTGTGGAGGGACAAGAAAACCTTCAGGAGATTCTGAGCAAGCAACTGCTCCTGTGTCAATTTCTTACCGCCCTGTCTGTCGTCAGACCAGGAGGCCATTTTTTGTGCAAGACGTTTGACTTGTTCACTCCGTTCAGCGTGGGCTTGATTTATCTGCTGTACCTCTGCTTCGAGAGGGTCTCGCTCTTCAAACCCGTCACCAGTCGGCCTGCCAATTCAGAGAGGTACGTGGTGTGCAAGGGTTTAAAACCAGGCACGGATGCCGTCAGAGAATACATGTTCACCATCAACCTGAAGCTGAATCAGTTCAGACACTCAGACAGAGACGTTATTGAAGTCGTCCCTCTGGACATCATTAAAGGAGACACTGACTTCTTCCAATACATGATCGGCTCCAATGAAAGCTATTGTGCGGTTCAGATCAAAGCTCTGGCGAAGATCCACGCGTACGTCAGAGATACGACGCTGTTTGAGGCCAGGCAAGCAGACATACGCAAAGAATGCTTGAAATTGTGGGGGATCCCTGATAAAGCAAGAGTCACTCCGTCAACGTCAGACCCCAAAAACAAGTTTTATGAGCTTGTGAAGGGTTCAGAAATGGACAGTTTTAACTCCAGACCTACTGCACTGAACTCTGTAAATCTGGAGAAACTACAGCACGTGCTGGACTACAGGTGCATTGTGGGAGGTGGAGAACAGCTTTTTCTCCTGGCACTTGGGAGATCTCAGATTTACACGTGGGACGGTAAAGCCCCTTCACGGTGGAAGAAACTGGAGAACTTCAAAATGGAGCTTCCCAGAGACACATTGCTGAGCGTAGAGATCGTCCAGGAGCTGAAGGGAGAGGGAAAAGCCCAGCGAAGGATCAACGCTGTGCATGTTCTCGATGCTCTTGTTCTCAACGGCACTGACGTCAGAGATCAGCACTTCAACCAGAGaaTCCAGATGGTGGAGAAGTTTGTGAAAGCCGTGTCCAAACCCAGCAGGCCCGACATGAACCCGATCCGAGTGAAGGAAGTCTATAGGTTGGAGGAGATGGAGAAAATCTTTGTGAGGTTGGAAATGAAGATAACCAAAAGTTCAGGAGGGATGCCGAGACTATCGTACACAGGCAGAGATGATCGTCACTTCCTCCCGACCGGCCTTTACATCATCAAAACAGTGAATGACCCATGGACAATGGCTTTCAGCAAAAGTTCTAAAAGAAAGTTTTTCTACAACAAGCAGACCAAAGAATCCACTTACGATCTGCCAGCCACTTCTGTGGCACCTTTCCACGTGTGTCATCAAGACAGGCTGTTTTGGGCTTGGGAGGAAGGCGTCCGAGTTCACGACTCCCAGACGAGGATCAACCCTGACAAGCTCTCCAAAGATGATGTGGTTTCCTTCATCCATAAGCACTATCAACAAtaaccacacacatgcacacacaaagtaACAGACTGTTCATTCTCCTGTCCACCAGGAGGCACTGTAGCTTTCAAAACAGTCCAGCATTCTGCTCAGTTTCTACACACTTCAGGGCTTCAGAAATAGACAGCAGTGTGTATCTGCATGTGTCTGGCATTTCTAGAGGAGAAACTTAGATCACACTGCTTTTCGCTTGTTGGTGTGTTTTTCTCCTGAACTTCAACCCCCCTCCACCCCACGCCCCTGATTCCTCGTATGAATTTTTCCTCTGCTAAACCGTTCGATTTTTAGATCCATCCCGTCAGTGCGATAACCGCGTTTAACAAAAGCGCATGGCGGTTAGCATTGGCTCTACTGTGTTGCATGTGTCGCCTTGCGCTCTTCATTTtggtttgtatttcttttttcagTGTTTACAAATATTAGACTGACTGTTCTGAGGGGAAAACATGTCGATTTTAAGACTATTCGTGATCATGGTTGTATTAAAATCATGGAGGAAGAATATTCCATGTTGGTCCCGCTTTGTTATTCTTCTCGAAtggttttacatttttgtttggtTTAATGGAAGATTGAAAATAGAAAAAGGACAGAGACAAATGTTTAGCAATATTTTCATTAGTATTTATATAATTctgttattatattacattatattaggggcgaagcagtggcgcagtaggtagtgctgtcgcctcacagctaataggtcgctgggtcgagctcagttggcgtttctgtgtggagtttgcatgttctccctgcgttcgcgtgggttttctccaggtgctccggtttcccgcacagtccaaagacatgcggtacaggtgaattgggtaagctaaattgggtaaggtaaattgtccatagtgtataagtgtgtgtgtgtgtgtgaatgtgtgtggatgtttcccagagatgggttgcagctggaagggcattcactgcgtaaaaacttgctgtataagttggcagttcattccgctgtggcgaccccggattaataaagggactaagccgacaagaaaatgaatgaatgaatattacattaGATAAGATCAGATTAGATTAAACGCCCTTTACtggattaaataatttttatggagacaaattgtgtataaatgtttttattagtatttttaaatattattatattaaattatattgtattatatcatattatattatattatattataggccatttcaatgtggtcatgtcattggtccATAGACATTTCCTGCTTGTAGGCAAACTGTTTCATAACTTTAGCATGAggaaattcaatcataacttagttaaaacagctgtcataatattatttatcaatatgtggctctttttggattctcggaagctattgaaattaaaaatgtaaaataggaaATGCGTTGAGACCATTGTTTTTTGTATACATCCCTCAAGATGTTCTATAATAAACGCCTTCTGCTGGATTAAATATTTTTCATGGAGacaaattgttaataaatattgttattagtGTTTATGTAATTGAGTCtgatattatgttatgttatattattgttatattaaataGC
>TCONS_00044414
ATGTGACGTCATCAACATGCACCAGCAGTACGGATTTGTGACCCATTGGATTAAACATGAAGAGAGCAGCACAAGCATCAGACGAGCCTCTGAAGAAGAGGAAGACGGCCCGTGAGGAATCGTCCGATGAAGATGAGGAGTCTTCTCAAAGAACCACCAGTCAGGACTCGAGTCAGAGTGAATCTCTCAGTGATGTTGAGGATCATAAACCCAGTTTCTCCAGGCCATCTGATTCCCAAAATTCTCAAGGCAGCATGGCCCATAATGAAGCCTCTAACAAATTTGCGATGTACAATAATGTCTCTCAGAAACTCATGGCCAAAATGGGTTTCCGAGAAGGCGAGGGTTTGGGAAAGTATGGTCAGGGCCGGAAGGAGATTGTGGAAGCGTCGACTCAGCGTGGGCGCCGGGGTTTGGGTCTGATGCTGAAGGGCTTTCAGGGTGACCTAAATGTAGACTGGGAAGATGAGCCGGAGCCGAGTGCTATAGAACAGGTGTCGTGGTTTCCAGAAAGTTCTCCAGAGATCCCAGATTCGGATGAGCTGAGGGATTGGATGACCATTGGAGAGaaaaaattaaaaattgacgATGAAATCGAGTTTTGCTCAGAGAATCTGCTGCATCTCCTTCTCCGCTGTAAAACTGTGTTTGATGACTTGGAAGGTGAGGAGATGAGGCGAGCGCGCACTCGATCAAACCCGTATGAAACCATCCGAGGGGCTTTTTTTcttaacagAGCTGCTATGAAGATGGCGAACATGGATCATGTTTTTGACTATATGTTCACCAACCCAAAAGACTCTCAAGGGaaagtCCTGACGCGTGATAAAGAGGGTGAATTGCTGTATTTCGGAGACGTTTGCGCAGGACCGGGAGGATTCTCGGAGTATGTGTTGTGGCGACGGCGCTGGCATGCTAAAGGTTTTGGGATGACACTTAAAGGAGCAAATGATTTCAAGCTGGAAGATTTCTATGCTGCACCTAGTGAGCTCTTTGAGGCCTATTACGGTGAGGGTGGGATCGATGGCGATGGTGACATCACACGGCCCGAGAACATCAGTGCGTTTCGTAATTTTGTCTTGGACAGCACTGAGGGCCGGGGCCTGCACTTCTTAATGGCGGATGGGGGCTTTTCTGTGGAGGGACAAGAAAACCTTCAGGAGATTCTGAGCAAGCAACTGCTCCTGTGTCAATTTCTTACCGCCCTGTCTGTCGTCAGACCAGGAGGCCATTTTTTGTGCAAGACGTTTGACTTGTTCACTCCGTTCAGCGTGGGCTTGATTTATCTGCTGTACCTCTGCTTCGAGAGGGTCTCGCTCTTCAAACCCGTCACCAGTCGGCCTGCCAATTCAGAGAGGTACGTGGTGTGCAAGGGTTTAAAACCAGGCACGGATGCCGTCAGAGAATACATGTTCACCATCAACCTGAAGCTGAATCAGTTCAGACACTCAGACAGAGACGTTATTGAAGTCGTCCCTCTGGACATCATTAAAGGAGACACTGACTTCTTCCAATACATGATCGGCTCCAATGAAAGCTATTGTGCGGTTCAGATCAAAGCTCTGGCGAAGATCCACGCGTACGTCAGAGATACGACGCTGTTTGAGGCCAGGCAAGCAGACATACGCAAAGAATGCTTGAAATTGTGGGGGATCCCTGATAAAGCAAGAGTCACTCCGTCAACGTCAGACCCCAAAAACAAGTTTTATGAGCTTGTGAAGGGTTCAGAAATGGACAGTTTTAACTCCAGACCTACTGCACTGAACTCTGTAAATCTGGAGAAACTACAGCACGTGCTGGACTACAGGTGCATTGTGGGAGGTGGAGAACAGCTTTTTCTCCTGGCACTTGGGAGATCTCAGATTTACACGTGGGACGGTAAAGCCCCTTCACGGTGGAAGAAACTGGAGAACTTCAAAATGGAGCTTCCCAGAGACACATTGCTGAGCGTAGAGATCGTCCAGGAGCTGAAGGGAGAGGGAAAAGCCCAGCGAAGGATCAACGCTGTGCATGTTCTCGATGCTCTTGTTCTCAACGGCACTGACGTCAGAGATCAGCACTTCAACCAGAGaaTCCAGATGGTGGAGAAGTTTGTGAAAGCCGTGTCCAAACCCAGCAGGCCCGACATGAACCCGATCCGAGTGAAGGAAGTCTATAGGTTGGAGGAGATGGAGAAAATCTTTGTGAGGTTGGAAATGAAGATAACCAAAAGTTCAGGAGGGATGCCGAGACTATCGTACACAGGCAGAGATGATCGTCACTTCCTCCCGACCGGCCTTTACATCATCAAAACAGTGAATGACCCATGGACAATGGCTTTCAGCAAAAGTTCTAAAAGAAAGTTTTTCTACAACAAGCAGACCAAAGAATCCACTTACGATCTGCCAGCCACTTCTGTGGCACCTTTCCACGTGTGTCATCAAGACAGGCTGTTTTGGGCTTGGGAGGAAGGCGTCCGAGTTCACGACTCCCAGACGAGGATCAACCCTGACAAGCTCTCCAAAGATGATGTGGTTTCCTTCATCCATAAGCACTATCAACAAtaaccacacacatgcacacacaaagtaACAGACTGTTCATTCTCCTGTCCACCAGGAGGCACTGTAGCTTTCAAAACAGTCCAGCATTCTGCTCAGTTTCTACACACTTCAGGGCTTCAGAAATAGACAGCAGTGTGTATCTGCATGTGTCTGGCATTTCTAGAGGAGAAACTTAGATCACACTGCTTTTCGCTTGTTGGTGTGTTTTTCTCCTGAACTTCAACCCCCCTCCACCCCACGCCCCTGATTCCTCGTATGAATTTTTCCTCTGCTAAACCGTTCGATTTTTAGATCCATCCCGTCAGTGCGATAACCGCGTTTAACAAAAGCGCATGGCGGTTAGCATTGGCTCTACTGTGTTGCATGTGTCGCCTTGCGCTCTTCATTTtggtttgtatttcttttttcagTGTTTACAAATATTAGACTGACTGTTCTGAGGGGAAAACATGTCGATTTTAAGACTATTCGTGATCATGGTTGTATTAAAATCATGGAGGAAGAATATTCCA
>TCONS_00044415
AGTACGGTAAGACCCACTGAGAGTGGAACGCGGGCCAGACTTGACATTTGAAAAGAAAACTTAAAGCAGAAACCGTGAAGAAACTGTGCAGATTGGATACAAATATGAGAGTACAGTTCGGAGGCGACTCAGGATAATAGCTGCATATTTTCTTTTAGGATTTGTGACCCATTGGATTAAACATGAAGAGAGCAGCACAAGCATCAGACGAGCCTCTGAAGAAGAGGAAGACGGCCCGTGAGGAATCGTCCGATGAAGATGAGGAGTCTTCTCAAAGAACCACCAGTCAGGACTCGAGTCAGAGTGAATCTCTCAGTGATGTTGAGGATCATAAACCCAGTTTCTCCAGGCCATCTGATTCCCAAAATTCTCAAGGCAGCATGGCCCATAATGAAGCCTCTAACAAATTTGCGATGTACAATAATGTCTCTCAGAAACTCATGGCCAAAATGGGTTTCCGAGAAGGCGAGGGTTTGGGAAAGTATGGTCAGGGCCGGAAGGAGATTGTGGAAGCGTCGACTCAGCGTGGGCGCCGGGGTTTGGGTCTGATGCTGAAGGGCTTTCAGGGTGACCTAAATGTAGACTGGGAAGATGAGCCGGAGCCGAGTGCTATAGAACAGGTGTCGTGGTTTCCAGAAAGTTCTCCAGAGATCCCAGATTCGGATGAGCTGAGGGATTGGATGACCATTGGAGAGaaaaaattaaaaattgacgATGAAATCGAGTTTTGCTCAGAGAATCTGCTGCATCTCCTTCTCC
>TCONS_00044416
GTGCAGATTGGATACAAATATGAGAGTACAGTTCGGAGGCGACTCAGGATAATAGCTGCATATTTTCTTTTAGGATTTGTGACCCATTGGATTAAACATGAAGAGAGCAGCACAAGCATCAGACGAGCCTCTGAAGAAGAGGAAGACGGCCCGTGAGGAATCGTCCGATGAAGATGAGGAGTCTTCTCAAAGAACCACCAGTCAGGACTCGAGTCAGAGTGAATCTCTCAGTGATGTTGAGGATCATAAACCCAGTTTCTCCAGGCCATCTGATTCCCAAAATTCTCAAGGCAGCATGGCCCATAATGAAGCCTCTAACAAATTTGCGATGTACAATAATGTCTCTCAGAAACTCATGGCCAAAATGGGTTTCCGAGAAGGCGAGGGTTTGGGAAAGTATGGTCAGGGCCGGAAGGAGATTGTGGAAGCGTCGACTCAGCGTGGGCGCCGGGGTTTGGGTCTGATGCTGAAGGGCTTTCAGGGTGACCTAAATGTAGACTGGGAAGATGAGCCGGAGGTAACATTGGTGGAATTGTTCTGCACTGTAGAGAAAGAATCCATTATTGCTTTCTCATGCATCATGTTTTCTCTTAGCCGAGTGCTATAGAACAGGTGTCGTGGTTTCCAGAAAGTTCTCCAGAGATCCCAGATTCGGATGAGCTGAGGGATTGGATGACCATTGGAGAGGTATTGCAATGAACTCAAACTCTTAGGCCACTATCATTCACCCGACGCAATGA

Function

symbol description
cmtr1 Predicted to enable mRNA (nucleoside-2'-O-)-methyltransferase activity. Predicted to be involved in 7-methylguanosine mRNA capping and cap1 mRNA methylation. Predicted to act upstream of or within mRNA processing and methylation. Predicted to be active in cytoplasm and nucleus. Orthologous to human CMTR1 (cap methyltransferase 1).

GO:

id name namespace
GO:0097309 cap1 mRNA methylation biological_process
GO:0006370 7-methylguanosine mRNA capping biological_process
GO:0006397 mRNA processing biological_process
GO:0080009 mRNA methylation biological_process
GO:0032259 methylation biological_process
GO:0005634 nucleus cellular_component
GO:0005737 cytoplasm cellular_component
GO:0004483 mRNA (nucleoside-2'-O-)-methyltransferase activity molecular_function
GO:0016740 transferase activity molecular_function
GO:0008168 methyltransferase activity molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG:

id description
ko03019 Messenger RNA biogenesis

ZFIN:

id description
ZDB-GENE-040426-696 Predicted to enable mRNA (nucleoside-2'-O-)-methyltransferase activity. Predicted to be involved in 7-methylguanosine mRNA capping and cap1 mRNA methylation. Predicted to act upstream of or within mRNA processing and methylation. Predicted to be active in cytoplasm and nucleus. Orthologous to human CMTR1 (cap methyltransferase 1).

Ensembl:

ensembl_id ENSDARG00000030830

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044413 False 4296 mRNA 0.44 23 35361724 35396978
TCONS_00044412 False 4365 mRNA 0.44 24 35361724 35396978
TCONS_00044414 False 3055 mRNA 0.48 24 35362775 35396871
TCONS_00044415 False 759 mRNA 0.47 6 35389266 35396845
TCONS_00044416 True 740 lncRNA 0.47 4 35393107 35396760

Neighbor

gene id symbol gene type direction distance location
XLOC_022519 cpne9 coding downstream 13986 35244378 ~ 35347738 (-)
XLOC_022518 NA coding downstream 158640 35200692 ~ 35203084 (-)
XLOC_022517 klf15 coding downstream 165816 35187683 ~ 35195908 (-)
XLOC_022516 BX294434.1 coding downstream 279230 35027177 ~ 35082494 (-)
XLOC_022515 NA coding downstream 593573 34767321 ~ 34768151 (-)
XLOC_022521 fbxo25 coding upstream 71856 35468834 ~ 35483310 (-)
XLOC_022522 fam110c coding upstream 89059 35486037 ~ 35491587 (-)
XLOC_022523 NA coding upstream 143382 35540360 ~ 35549662 (-)
XLOC_022524 tmem18 coding upstream 245083 35642061 ~ 35649000 (-)
XLOC_022525 NA coding upstream 266874 35663852 ~ 35669221 (-)
XLOC_022513 CT025912.1 non-coding downstream 1392736 33968866 ~ 33968988 (-)
XLOC_022509 NA non-coding downstream 1622613 33731189 ~ 33739111 (-)
XLOC_022506 NA non-coding downstream 1742878 33608009 ~ 33618846 (-)
XLOC_022530 BX546466.1 non-coding upstream 467748 35864726 ~ 35864853 (-)
XLOC_022532 NA non-coding upstream 623818 36020796 ~ 36051826 (-)
XLOC_022533 BX005254.3 non-coding upstream 684447 36081425 ~ 36088234 (-)

Expression


Co-expression Network