Gene
RNA
| Item | Value |
|---|---|
| gene id | G339583 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 28704131 ~ 28704994 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106582567 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU384317 | True | 801 | lncRNA | 0.38 | 2 | 28704131 | 28704994 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110522446 | bmp2 | coding | upstream | 67618 | 28630004 ~ 28636513 (+) |
| LOC110522445 | LOC106608054 | coding | upstream | 136831 | 28558200 ~ 28567300 (+) |
| LOC110522440 | atad2b | coding | upstream | 741764 | 27800923 ~ 27962367 (+) |
| LOC118964460 | NA | coding | upstream | 831153 | 27871143 ~ 27872978 (+) |
| LOC110522435 | wdcp | coding | upstream | 939579 | 27757433 ~ 27764552 (+) |
| LOC110522448 | plcb4 | coding | downstream | 253090 | 28958084 ~ 29140138 (+) |
| LOC110522450 | LOC106608065 | coding | downstream | 448480 | 29153474 ~ 29163882 (+) |
| LOC118964462 | NA | coding | downstream | 470332 | 29174963 ~ 29176894 (+) |
| LOC118964461 | NA | coding | downstream | 477885 | 29182879 ~ 29186037 (+) |
| LOC110522451 | LOC106608077 | coding | downstream | 634542 | 29339536 ~ 29348164 (+) |
| G339562 | NA | non-coding | upstream | 47579 | 28656192 ~ 28656552 (+) |
| G339376 | NA | non-coding | upstream | 131364 | 28571319 ~ 28572767 (+) |
| G339362 | NA | non-coding | upstream | 151818 | 28545713 ~ 28552313 (+) |
| G339334 | LOC100194698 | non-coding | upstream | 206369 | 28491256 ~ 28497762 (+) |
| G339265 | NA | non-coding | upstream | 308029 | 28395892 ~ 28396102 (+) |
| G339590 | NA | non-coding | downstream | 7969 | 28712963 ~ 28713614 (+) |
| G339591 | NA | non-coding | downstream | 8907 | 28713901 ~ 28714105 (+) |
| G339592 | NA | non-coding | downstream | 9217 | 28714211 ~ 28714439 (+) |
| G339594 | NA | non-coding | downstream | 11648 | 28716642 ~ 28717062 (+) |
| G339597 | NA | non-coding | downstream | 18945 | 28723939 ~ 28724145 (+) |
| LOC118964415 | LOC106608050 | other | upstream | 1102575 | 27537262 ~ 27601564 (+) |
| LOC110522355 | plekhg1 | other | upstream | 1519161 | 27054628 ~ 27185449 (+) |
| G336464 | NA | other | upstream | 1809294 | 26892229 ~ 26894837 (+) |
| LOC110522376 | sash1 | other | upstream | 2646440 | 25761890 ~ 26057813 (+) |
| G334473 | armt1 | other | upstream | 4281400 | 24420114 ~ 24422731 (+) |
| G339660 | NA | other | downstream | 153722 | 28858716 ~ 28859155 (+) |
| G339693 | NA | other | downstream | 209605 | 28914599 ~ 28915539 (+) |
| G339830 | LOC100846954 | other | downstream | 461524 | 29166518 ~ 29166996 (+) |
| G339928 | NA | other | downstream | 630375 | 29335369 ~ 29336939 (+) |
| G342538 | NA | other | downstream | 2676832 | 31381826 ~ 31382749 (+) |
