XLOC_022663 (fhdc5)


Basic Information

Item Value
gene id XLOC_022663
gene name fhdc5
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 44903304 ~ 44916800 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044614
GAAACTATTTGTAAAATAGCTGATAAAGAAGCCTCTTTCTGTCTTCATCTTGACATTCAATTGTTCATTTTTGCGGGGCGTGGCTTTAAGAAACATTCTAATGATGTCATTAACCATCTGACCCCACCCACATCTTCTTCTACTATGAGTGGCGTCTCGCTAACCAATGAGAGCTGGGGATTTGATAAAGAGGGTGGGGCTTTTGTTTTAACCGCCCCTCCTCCAGCTCCGCCCCCTCCCCCACCCCTGCCTGCTGTACACTCTGCAGAGCGGAAGAGGAGGGTGAAGAGTTTCTTCTGGAAACCCATCCCTGAGGATCGAGTTCGTCAGCAGGACAGAACCAATCTGTGGAGCCTCAGGCAGGACAGCAGAGAGCAGACGCTCCACATCGACATCACTGCCATCCAGGAGCTGTTCGGACACCCGCAGGAAACGCCGACGCTCAGACCAGCTCCTGTCAGAGACCGCAGACAGcagGTCAGCCTCCTGGACTCCAAGAGAAGCTTGAATATCTCCATTTTCcttaaacactttaaaaaGTCCCCTGAGTGTCTTCTGGATGCTGTTCTTCAGGGAAACACAGGAGTTTTCACTGCGGAGTCTCTGAAAGAGCTGCTCAAGCTCCTGCCGGAGGAGGACGAGgtgaAGAATCTTCAGATGTTCAGTGGAGACCTCAAAGACCTGGCACCACCTGATGCCTTCATACACCAGCTCATCAATTTACCCAGGTATGAGGATCTTCTCCAGGCTCTGCTACTGAAGGAGGAGTTTTTCCCCTCAATCACAGTCATGAAAGACGAGCTCTCCGTCATCCTGAGCGCCATTAACGAGCTGCTGAACTGTGAGGAGCTCCACACTGTCCTGCATTTAGTGCTGCAAGCTGGAAACGTCATGAATGCTGGTGGCTCTGCTGGAAATGCTGTGGGCTTCAGACTCTCGTCTCTTCTTTCTCTGGCCGACACTAAAGCCAACAAACCCGGGATGAACCTGCTGCACTTTGTGGCTCTGgaAGCTGAGAAGAAAGATCTGCTGCTGTTTCCAGACAAACTTCTGCATGTGCAGCGAGCAGCACGagtgtgtgtggacagtattcacacagactttaattcTCTGAGCCGGAGAGTTCTTCAGCTCCAGCAGATCCTCCACACAGATGAAGAGCTCCAGTCC
>TCONS_00044615
AGGGTGGCTCTGCTGGAAATGCTGTGGGCTTCAGACTCTCGTCTCTTCTTTCTCTGGCCGACACTAAAGCCAACAAACCCGGGATGAACCTGCTGCACTTTGTGGCTCTGgaAGCTGAGAAGAAAGATCTGCTGCTGTTTCCAGACAAACTTCTGCATGTGCAGCGAGCAGCACGGTGAGAGCAGCACTCCACAATCACTAGCTGTGTTTCCATATAAAGATGCCAATTACATTTATatgcaaaactgaaatattgcatgaaacttttgtgaataaagcagcatttccatccac

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000095962

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044614 False 1170 mRNA 0.51 10 44903304 44916800
TCONS_00044615 True 294 lncRNA 0.46 2 44904903 44905923

Neighbor

gene id symbol gene type direction distance location
XLOC_022662 fhdc5 coding downstream 256 44901398 ~ 44903048 (-)
XLOC_022661 plod3 coding downstream 24090 44843860 ~ 44879214 (-)
XLOC_022660 CU682777.1 coding downstream 64465 44824083 ~ 44838839 (-)
XLOC_022659 st8sia7.1 coding downstream 84204 44797665 ~ 44819100 (-)
XLOC_022658 NA coding downstream 108856 44787967 ~ 44794448 (-)
XLOC_022664 tfr2 coding upstream 23900 44940700 ~ 44965582 (-)
XLOC_022665 ctc1 coding upstream 53414 44970214 ~ 45022681 (-)
XLOC_022666 NA coding upstream 115666 45032466 ~ 45035485 (-)
XLOC_022667 sh3gl2b coding upstream 126501 45043301 ~ 45049044 (-)
XLOC_022668 si:ch73-168d20.1 coding upstream 160558 45077358 ~ 45119805 (-)
XLOC_022652 NA non-coding downstream 337535 44553065 ~ 44565769 (-)
XLOC_022650 NA non-coding downstream 381330 44515199 ~ 44521974 (-)
XLOC_022646 CABZ01071874.1 non-coding downstream 886222 44013682 ~ 44017082 (-)
XLOC_022669 NA non-coding upstream 211299 45128099 ~ 45136632 (-)
XLOC_022670 NA non-coding upstream 238243 45155043 ~ 45339439 (-)
XLOC_022681 NA non-coding upstream 917456 45834256 ~ 45841579 (-)
XLOC_022687 NA non-coding upstream 1126772 46043572 ~ 46047869 (-)

Expression


Co-expression Network