XLOC_022668 (si:ch73-168d20.1)


Basic Information

Item Value
gene id XLOC_022668
gene name si:ch73-168d20.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 45077358 ~ 45119805 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044619
ATAAAGGAGATCCTCCTCTCCTGAGTCCAGCTGTGTGTCCATAAAGAGTGACGCTTCAATGGACAATCCACCAACACTCAGATTGGGAGAATCTCCTGCGAAACACAGgAGATCCTCCTCTCCTGAGTCCAGCTGTGTGTCCATGAAGAGCGACGCTTCAATGGACAATCCACCAACACTCAGATTGGGAGAATCTCCTGCTAAACACAGTGACAACCAAAAGCGATCACAGTCAAATAAAGGCCAGAAGCAGCTAGACGCCATTTTCAAGGACCTTGAGGAAACAAACATAGATGAGATGAGGAAAGTGTTGAGAAGATTCAAGATGCTGCTTAGTCCAGATTACTCTGTGagagatgaggaggaggaggaaggtcAACGTCAAATAAACGAGGCATTTCTGAAGATCACTCTTCATGCCCTCCAGAAGATGAACCAGACGGACCTCGCTAGCAAACTACAAACCAAGTTAATCTCCGTGAGTCAACAACAGCTCAAATCCAGACTGAAGCAGAGATTTGAGAGATTTACTGAAGGAGTCTCAAATCGAGGCAATACAAAACTTCTGAATGACATCTACACAGAGGTTTACATCACTGAGGGAGGGGCTGGAAACATTGACGATGAGCACGAGGTGAGACAGATCGAGACCTCGTCGTCCAGATTTCCAGAGATACCGATTAGATGTTGCGACATCTTCAAATCCTTACTGGGACAGGACAAAGCCATCAGAACGGTTCTGACCAAAGGAGTAGCTGGAATCGGAAAAACCGcttctgtgcagaagttcatcctAGACTGGGCAGAAGGAAAAGCCAATCAGGATGTTCACTTCATATTTCCGCTTCCTTTCAGAGACTTGAATTTGATAAAGGAGAAACGGATGAGTCTGATGGAGCTCCTTTGCTGTTTTTGCCCAGAACTAAAACCGATAGACTATAACAACTTCAAAACAGTCTTCATCTATGATGGTCTGGATGAGTGGCGCCTTCCTCTGGATTTCCGGAACAATGAGATTTTGTGGGATATGAACAAAGTGGCCTCTGTGGATGCACTGCTTACCAACCTCCTCCAGGGGAACCTGCTTCCTTCTGCTGTCCACTGGATCACCACACGACCAGCCGCAGCCTGTCAGATCCCAGCTGAGTTTATTGATCGGGTCACCGAGGTACGAGGGTTCAAAGATCTTCAGAGAGCAGAGTATTTCTGGAAAAGAATAAAAGATCAGAATCTTGCCAACAAGATCATCACACACATTCAATCATCAAGAAGCCTTCACATCATGTGCCGCATCCCAGTGTTCTGCTGGATCTCCGCCACTGTTCTTGAGAAGATCTTTGGTGAAGCGAATAGTGCAGACATTCCCAAAACTCTCACTCAAATGTTCATACACCTGCTGATCGTTCAGACCAATCTGAAGACCCAGAAATATGACCGAGAATGTGATGTAAATCTTGAGAAGGCAAGAAAGAGCATCTTGTCACTTGCGAAACTGGCATTTGAGCAACTGGAGAAAGGGAACCTGATCTTCTATGAAGAGGATTTGAAACAGTGTGGCATTGATGTCCGAGAAGCGTCCGTGTGCTCTGGagtgtgtacccagatctttcgGGAAGAGTTTGGGCTGCAGCTTCAAAAGGTGTTTAGCTTTGTACATCTGAGTGTTCAGGAGTTTCTCGCTGCcttgtttaagtttctttcctTTGCTGAAGAAAACAACAAGTCCTCAATGACACAGTTTATGAAGAACGAAGTGGACAGGGCCTTGCAGAGTCCGAACGGACACCTTGATCTCTTCTTACGTTTTCTTCTGGGTCTTTCACTGGACTCCAATCAGACTCTCCTACAGGGATTATTCACTCCGTTGGATACCTCTCACAGCAGAGACGAGACTATTGagtatataaaaagtaaaatcagAGAAAATCCGTCTCcggagagatccatcaatctgttttaCTGCCTAAATGAGCTGAATGATCATTCTCTGGTGCAGGAGGTCCAAACATATCTAACCAGCACACGCAGCCATCGCCTCTCTGGAGTGAAACTGTCTCCGGCCCTGTGGTCAGCACTGGTGTTTGTGTTGCTGAACTCGACAAAGGACCTGGACGAGTTTGAGCTCAGGCAATACGATTTTACAGAGGAGTGTCTTCTGAGGCTGCTACCGGTGGTCAAAGCTTCCAGAAAAGCAGATTTGAAAGGTGGTAATCTCACAGATCAGATCTGTTCAGCTCTGGCCTCTGCTCTCAGCTCGAGCTCCTGCTGTCTGCGAGAACTGGACCTCAGTGAAAACAGGCTCCAGCTTTCAGGAATACGACTTTTCTCTGCAGGACTGAAGAGCCCTAACTGTAAGCTGGAGATACTCAAGTTGAGCAACTGCAGTATTAGAGAGGAAGGCTGTGCTTCTCTGGTTTCTGCTCTTCTCTCAAACCCGTCTCATCTGAGAGAACTCAACCTGAACTCCAATCAACCAGGATATTCAACAGTGAAGCTTTTGTCTGATCTTCTGGAGAATccacactgtaaactggagaaactACAGTTGTATAACTGCTGTATTGGTGAGGAAGGCTGTGCTGCTCTGGCTTTAGCTCTGATATCAAACCCGTCTCATCTGAGAGAACTCAATCTGAACAATAATGAACCAGgcgattcaggagtgaagcttctctctgatctGCTGAAGGATCCGCGCTGTAAACTGGAGAAACTACAgCTTAATGGTAGCAATATCAGAGAGAAAGATTGTGCTGCTTTCATTTCATCTCTTCTATCAAACCCGTTTCATCTGAGGGAACTCAGTTTGAGCTGGAACAAACCTGGCGACTCTGGAGTCAAGCTTTTGTCAGATCTTCTGAAAGATTCTCGCTGTAAACTGGAAAAACTGGAGCTGGAGTGCTGCAGTATTATAGAGGAAGGCTGTGCTGCTCTGGCTTTAGCACTTGTATCAAACCCATCTCACCTGAGAGAACTCAATCTAAACAATAATGAACCAGGAGACCTAGGAGTGAACCTTTTGTCTTTTCTTCTGAAAAATCCACAATGTAAACTAGAGAAACTGGAGCTGGAATACTGCTGCATAGGTGCAAAAAGTTGTGCTTCTCTGGCTTCTGCTTTTGTATCCAACCCGTCTCATCTGAGAGAACTCAATCTGAACTGGAACACACCAGAATATCCTGCAGTGAAGCTTCTGTCTGATTATCTGAAGGATccacactgtaaactggagaaactACAGTTGTATAACTGCTGTATTGGTGAGGAAGGCTGTGCTGCACTGGCTTTAGCTCTGATATCAAACCCGTCTCATCTGAGAGAACTCAATCTGAACAATAATGAACCAGgcgattcaggagtgaagcttctctctgatctGCTGAAGGATCCGCGCTGTAAACTGGAGAAACTACAGCTGGAATACTGCTGTATCGGTGAGGAAGGTTGTGCTGCTCTGGTTTCAGGTCTGAAATCGAACCCGTCACACCTGAGGGAACTCAATCTGAACAGAAACGAACCTGGAAacttaggtgcaaagatgctgtCAGATCTCCTGAAGGATCCGCTGTTTGAACTTGAGAAACTAGAGCTCGATGACTGCAGTATTGAAAACAATGGTTTTGCTGATCTAGTTTCAGGCCTGAAATCAAACCCATCAAACATCAGAGAGCTCAATCTGAACTCTAATAAATTCATCTTCTCTGGATTAAATCTACTCTGTGACCTGCTGAGAGATCAGCAGTGTAAACTGCGGAAGCTACAGCTGGAGTGCTGCAATATAGATGAGGAAGGCTGTGCTGCTCTGGCTTTAGCACTGATATCTAACCCGTCTCATCTGAGAGAACTCAATCTGAATTACAACAATCCAGGAGGCCTTGGAGTGAAGCTTCTGTCTGTTCTTCTGAAGAATccacactgtaaactggagaaactGGAGTTGTCTCATTGCAGTATTTCAGAGAATTACCTTGCTGCTCTAAATTCAGCTCTGAGTTCAAACCCAGCACACTTGAGGGAACTCAATTTGAACTACAATGAGAACACtagacaatgacacaaatcaacTAGAAGCACAGCAATTTAAACTAGTTAGGCTGTGTGTTTTATATACAAGCATatgatgtgtgtttatatataatatattcatcCTCCTGTTTGAATTCTTTCTCAAATacttcccaagtgatgtttaacagagcaaggac
>TCONS_00044620
GCGCTATTTGCTTTAGTAAATGTTTTCATGTTCATCTACAGTGACAACCAAAAGCGATCACAGTCAAATAAAGGCCAGAAGCAGCTAGACGCCATTTTCAAGGACCTTGAGGAAACAAACATAGATGAGATGAGGAAAGTGTTGAGAAGATTCAAGATGCTGCTTAGTCCAGATTACTCTGTGagagatgaggaggaggaggaaggtcAACGTCAAATAAACGAGGCATTTCTGAAGATCACTCTTCATGCCCTCCAGAAGATGAACCAGACGGACCTCGCTAGCAAACTACAAACCAAGTTAATCTCCGTGAGTCAACAACAGCTCAAATCCAGACTGAAGCAGAGATTTGAGAGATTTACTGAAGGAGTCTCAAATCGAGGCAATACAAAACTTCTGAATGACATCTACACAGAGGTTTACATCACTGAGGGAGGGGCTGGAAACATTGACGATGAGCACGAGGTGAGACAGATCGAGACCTCGTCGTCCAGATTTCCAGAGATACCGATTAGATGTTGCGACATCTTCAAATCCTTACTGGGACAGGACAAAGCCATCAGAACGGTTCTGACCAAAGGAGTAGCTGGAATCGGAAAAACCGcttctgtgcagaagttcatcctAGACTGGGCAGAAGGAAAAGCCAATCAGGATGTTCACTTCATATTTCCGCTTCCTTTCAGAGACTTGAATTTGATAAAGGAGAAACGGATGAGTCTGATGGAGCTCCTTTGCTGTTTTTGCCCAGAACTAAAACCGATAGACTATAACAACTTCAAAACAGTCTTCATCTATGATGGTCTGGATGAGTGGCGCCTTCCTCTGGATTTCCGGAACAATGAGATTTTGTGGGATATGAACAAAGTGGCCTCTGTGGATGCACTGCTTACCAACCTCCTCCAGGGGAACCTGCTTCCTTCTGCTGTCCACTGGATCACCACACGACCAGCCGCAGCCTGTCAGATCCCAGCTGAGTTTATTGATCGGGTCACCGAGGTACGAGGGTTCAAAGATCTTCAGAGAGCAGAGTATTTCTGGAAAAGAATAAAAGATCAGAATCTTGCCAACAAGATCATCACACACATTCAATCATCAAGAAGCCTTCACATCATGTGCCGCATCCCAGTGTTCTGCTGGATCTCCGCCACTGTTCTTGAGAAGATCTTTGGTGAAGCGAATAGTGCAGACATTCCCAAAACTCTCACTCAAATGTTCATACACCTGCTGATCGTTCAGACCAATCTGAAGACCCAGAAATATGACCGAGAATGTGATGTAAATCTTGAGAAGGCAAGAAAGAGCATCTTGTCACTTGCGAAACTGGCATTTGAGCAACTGGAGAAAGGGAACCTGATCTTCTATGAAGAGGATTTGAAACAGTGTGGCATTGATGTCCGAGAAGCGTCCGTGTGCTCTGGagtgtgtacccagatctttcgGGAAGAGTTTGGGCTGCAGCTTCAAAAGGTGTTTAGCTTTGTACATCTGAGTGTTCAGGAGTTTCTCGCTGCcttgtttaagtttctttcctTTGCTGAAGAAAACAACAAGTCCTCAATGACACAGTTTATGAAGAACGAAGTGGACAGGGCCTTGCAGAGTCCGAACGGACACCTTGATCTCTTCTTACGTTTTCTTCTGGGTCTTTCACTGGACTCCAATCAGACTCTCCTACAGGGATTATTCACTCCGTTGGATACCTCTCACAGCAGAGACGAGACTATTGagtatataaaaagtaaaatcagAGAAAATCCGTCTCcggagagatccatcaatctgttttaCTGCCTAAATGAGCTGAATGATCATTCTCTGGTGCAGGAGGTCCAAACATATCTAACCAGCACACGCAGCCATCGCCTCTCTGGAGTGAAACTGTCTCCGGCCCTGTGGTCAGCACTGGTGTTTGTGTTGCTGAACTCGACAAAGGACCTGGACGAGTTTGAGCTCAGGCAATACGATTTTACAGAGGAGTGTCTTCTGAGGCTGCTACCGGTGGTCAAAGCTTCCAGAAAAGCAGAGTGAGTATATTCAAGAAGCTCATTTTAACATTCAGGGACAGTTGTTACGTGTTTGATGTTTATAGtgttagttcagccaaaaaagtaaatgattataataattacaCTCCCTCATGTTGTTAAAAACCCCTGAGATCTTCAATCATATTCAGAactcaaatgaagatattttagataaagtCTGAGCTCCTTCTTTCTCCATCATGACCCaggtaaactaaccctttaaaagaaATGATGTTGTAACATTTAAGTAATAAAATGATACAGGCCGTTGTCTCAGGCAGATCAATACTGCCAGATCAATACCCAAACAAAATGAGGGTAAGTTTCAGCAGTAGaatagtaaacaaaaaaaattatagaaaatataCAAGTTATCAACAATAAGAGAAATTTTTTAC

Function

symbol description
si:ch73-168d20.1 Predicted to be involved in intracellular signal transduction.

GO:

id name namespace
GO:0035556 intracellular signal transduction biological_process
GO:0005524 ATP binding molecular_function
GO:0000166 nucleotide binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-121214-44 Predicted to be involved in intracellular signal transduction.

Ensembl:

ensembl_id ENSDARG00000039900

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044619 False 4205 mRNA 0.45 16 45077358 45119805
TCONS_00044620 True 2431 mRNA 0.43 3 45100060 45111637

Neighbor

gene id symbol gene type direction distance location
XLOC_022667 sh3gl2b coding downstream 28314 45043301 ~ 45049044 (-)
XLOC_022666 NA coding downstream 41873 45032466 ~ 45035485 (-)
XLOC_022665 ctc1 coding downstream 54677 44970214 ~ 45022681 (-)
XLOC_022664 tfr2 coding downstream 111776 44940700 ~ 44965582 (-)
XLOC_022663 fhdc5 coding downstream 160558 44903304 ~ 44916800 (-)
XLOC_022669 NA coding upstream 8294 45128099 ~ 45136632 (-)
XLOC_022670 NA coding upstream 35238 45155043 ~ 45339439 (-)
XLOC_022671 sgms2b coding upstream 185025 45304830 ~ 45398655 (-)
XLOC_022672 aimp1b coding upstream 282323 45402128 ~ 45407724 (-)
XLOC_022673 CABZ01076996.1 coding upstream 302628 45422433 ~ 45439903 (-)
XLOC_022660 CU682777.1 non-coding downstream 238519 44824083 ~ 44838839 (-)
XLOC_022658 NA non-coding downstream 282910 44787967 ~ 44794448 (-)
XLOC_022652 NA non-coding downstream 511589 44553065 ~ 44565769 (-)
XLOC_022650 NA non-coding downstream 555384 44515199 ~ 44521974 (-)
XLOC_022681 NA non-coding upstream 714451 45834256 ~ 45841579 (-)
XLOC_022687 NA non-coding upstream 923767 46043572 ~ 46047869 (-)
XLOC_022689 NA non-coding upstream 1055199 46175004 ~ 46175766 (-)

Expression


Co-expression Network