G343242


Basic Information

Item Value
gene id G343242
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 32181284 ~ 32182676 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU388440
GTTCTGCATGGGCTTTATTTATTTCAAACGATTTTCTGAGTCTGCATTAGCCAATGTCAGTTTGTTTACTCTTCATTAGCCAATGTCAGTTTGTTTACCCTTCATTAGCCAATGTCAGTTTGTTTACTCTTCATTAGCCAATGTCAGTTTGTTTACCCTTCATTAGCCAATGTCAGGTTGTTTACTCTTCATTAGCCAATGTCAGTTTGTTTACTCTTCATTAGCCAATGTCAGAATGTTTACTCTTCATTAGCCAATGTCAGGTTGTTTACTCTTCATTAGCCAATGTCAGGTTGTTTACTCTTCATTAGCCAATGTCAAGTTGTTTACACTTCATTATATACGACCGTAAAAAGTAACACTATTTTTTAGGGGGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU388440 True 378 lncRNA 0.36 3 32181284 32182676

Neighbor

gene id symbol gene type direction distance location
antiprot1 antiprot1 coding upstream 57442 32121260 ~ 32123842 (+)
LOC118964510 NA coding upstream 88838 32092160 ~ 32092446 (+)
LOC110521080 ints9 coding upstream 98956 32072761 ~ 32082328 (+)
tdrd6 tdrd6 coding upstream 128442 32028040 ~ 32052842 (+)
LOC110522501 LOC106571602 coding upstream 165414 31980595 ~ 32015870 (+)
LOC110522505 LOC106608111 coding downstream 351905 32534581 ~ 32541487 (+)
LOC110520986 NA coding downstream 483612 32666288 ~ 32699603 (+)
rnh1 rnh1 coding downstream 661258 32843934 ~ 32850818 (+)
LOC110520987 NA coding downstream 671381 32854057 ~ 32865131 (+)
LOC118964496 NA coding downstream 728034 32910710 ~ 32912647 (+)
G343175 NA non-coding upstream 145951 32035123 ~ 32035333 (+)
G343153 NA non-coding upstream 154758 32026217 ~ 32026526 (+)
G343068 NA non-coding upstream 259190 31921553 ~ 31922094 (+)
G343051 NA non-coding upstream 280239 31900581 ~ 31901045 (+)
G343050 NA non-coding upstream 283067 31897935 ~ 31898217 (+)
G343394 NA non-coding downstream 21487 32204163 ~ 32204376 (+)
G343396 NA non-coding downstream 22748 32205424 ~ 32206262 (+)
G343404 NA non-coding downstream 32465 32215141 ~ 32215402 (+)
G343423 NA non-coding downstream 45951 32228627 ~ 32228998 (+)
G343435 NA non-coding downstream 51416 32234092 ~ 32234380 (+)
G342707 LOC106608120 other upstream 395078 31785865 ~ 31786206 (+)
G342571 NA other upstream 729808 31451133 ~ 31451476 (+)
LOC110522493 LOC106608104 other upstream 762028 31417955 ~ 31422086 (+)
G342538 NA other upstream 798535 31381826 ~ 31382749 (+)
G339928 NA other upstream 2844345 29335369 ~ 29336939 (+)
G343958 NA other downstream 512310 32694986 ~ 32704371 (+)
LOC110521085 LOC100380634 other downstream 1289376 33469529 ~ 33489784 (+)
G344647 NA other downstream 1369451 33552127 ~ 33554003 (+)
LOC110522521 NA other downstream 1402302 33584945 ~ 33586386 (+)
LOC110522536 LOC105024319 other downstream 2208297 34390869 ~ 34394175 (+)

Expression


Co-expression Network