G343776


Basic Information

Item Value
gene id G343776
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 32524715 ~ 32524923 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU389008
ACAGTACTCTGGGTAGTGTGGTTCTTCACCAGCCTCACAACAGTACTCTGGGTAGTGTGGTTCTTCACCAGCCTCCCAAAAGTACTCTGGGTAGTGTGGTTCTTCACCAGCCTCCCAATAGTACTCTGGGTAGTGTGGTTCTTCACCAGCCTCCCAACAGTGCTCTGGGTAGTGTGGTTCTTCACCAGCCTCCTAACAGTACTCTGGGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU389008 True 209 lncRNA 0.52 1 32524715 32524923

Neighbor

gene id symbol gene type direction distance location
antiprot1 antiprot1 coding upstream 400873 32121260 ~ 32123842 (+)
LOC118964510 NA coding upstream 432269 32092160 ~ 32092446 (+)
LOC110521080 ints9 coding upstream 442387 32072761 ~ 32082328 (+)
tdrd6 tdrd6 coding upstream 471873 32028040 ~ 32052842 (+)
LOC110522501 LOC106571602 coding upstream 508845 31980595 ~ 32015870 (+)
LOC110522505 LOC106608111 coding downstream 9658 32534581 ~ 32541487 (+)
LOC110520986 NA coding downstream 141365 32666288 ~ 32699603 (+)
rnh1 rnh1 coding downstream 319011 32843934 ~ 32850818 (+)
LOC110520987 NA coding downstream 329134 32854057 ~ 32865131 (+)
LOC118964496 NA coding downstream 385787 32910710 ~ 32912647 (+)
G343734 NA non-coding upstream 41326 32483147 ~ 32483389 (+)
G343679 NA non-coding upstream 96062 32428418 ~ 32428653 (+)
G343531 NA non-coding upstream 215836 32308624 ~ 32308879 (+)
G343529 NA non-coding upstream 217329 32307155 ~ 32307386 (+)
G343513 NA non-coding upstream 227701 32296792 ~ 32297014 (+)
G343813 NA non-coding downstream 28384 32553307 ~ 32553507 (+)
G343845 NA non-coding downstream 49113 32574036 ~ 32574311 (+)
G343861 NA non-coding downstream 62467 32587390 ~ 32587595 (+)
G343879 NA non-coding downstream 74257 32599180 ~ 32599995 (+)
G343910 NA non-coding downstream 92331 32617254 ~ 32617490 (+)
G342707 LOC106608120 other upstream 738509 31785865 ~ 31786206 (+)
G342571 NA other upstream 1073239 31451133 ~ 31451476 (+)
LOC110522493 LOC106608104 other upstream 1105459 31417955 ~ 31422086 (+)
G342538 NA other upstream 1141966 31381826 ~ 31382749 (+)
G339928 NA other upstream 3187776 29335369 ~ 29336939 (+)
G343958 NA other downstream 170063 32694986 ~ 32704371 (+)
LOC110521085 LOC100380634 other downstream 947129 33469529 ~ 33489784 (+)
G344647 NA other downstream 1027204 33552127 ~ 33554003 (+)
LOC110522521 NA other downstream 1060055 33584945 ~ 33586386 (+)
LOC110522536 LOC105024319 other downstream 1866050 34390869 ~ 34394175 (+)

Expression


Co-expression Network