XLOC_022685 (C23H1orf52)


Basic Information

Item Value
gene id XLOC_022685
gene name C23H1orf52
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 46030970 ~ 46034609 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044645
ggcggactttgtttAGATGTTATTGATCTCCGGTGTCCAGTATATCCAGAATCCCTGAATTCGACGTTTATTTTTTGAGCTCGTCCATCATGAGCGACGAGGAGAAATCAGAGACTCGTAACTTCTTCATGGGCTACGATGATCTGAGCGACAGCAGCAGTGACTCGGAGAGCCGCAGTGGGCCTGAAGCCACGGCCTCGTCTGCCCCAGCCGAGCCGCAGCAGAGCCGCAAACGCGCCGCGGAGCCGCTACCGAGACCTGACGAGCTGTTCCGCTCCGTCAGCAAACCCGCATTTCTCTACAACCCGCTCAATAAAGCCATCGACTGGGACAGCAGAGCCGTCAGAGCGCCGGAGGAGCCTCCTAAAGAGTTTAAGGTGTGGAAGAGCAGTGCGGTTCCCCCGCCGCAGTCCTACGTGACGGAGGAGAACAAGAAGAAAGCTCCTGCTGGAATGGACATGGCCATCAAATGGTCCAATGTGTACGAGGACAACGGAGATGACGCCCCTCAAGCCCACCGAGGCCCCGCCCACTTTCTGccagaggaggaagaggaggagcaaCAGCCAGACTCTGATGACGACTCCTCATCGAAGCTCAGTAAATCTGCTAAGAAGCGGCGTGTGGAGACGTTCCAGCAGAAGGAGAAGCGCAAGAGGGACATCGGCCAGGCCACGTCTGATAAGAACTTTGTGGAGGAGGAGAAGCGCATCCTCCGCCAGTGTCTGGACTgaacagagagagtgtgtgtgggtgtctgagtgcgtgtgtgtgtgcgcgagcaagagagtgtatgtgtgtgtactggttttggtggtttacaagaacACAAACATGTATAATGTCATGGGTATGACCCAGTCTCACTCTATTAATTCGGTTAATGTGGACTTttcttgtgtcctcataattcagaATGCTGTAGAGTCCTGCATAAGGGGGTTTTCCACTTTCAGTATTGTCCACAGGTGTGTGTGAGGGCTGGTTTAGGAGTAGGGCTTATCAGAAGCGATTTACTATAAAAAATGCATAAGCCtgtggagagtcctcataaaccaccaataccactgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcatatgtatgaatgtaggtgtgtgtgtgtttgtgcatgcatatgtgtgtgtgcgtggtgaTGTTCACCCTTCAACTGATTTTAATGTGTAGATCTTCATCTtcaggaggatgaggaggagtATAGCAGCACTATGAGTCTCGGACACTTTAAATATAATATCTcggtatcacacacacacacatgtgtaaGGAGTGTGTGTTGAGGACGGTTCCCGCAGGCTGCtgtaatgatgtgtgtgtgtgtgtgtgtgttgaacatcaCTGTAAGTATGATTGCTGATGTAGACTGTAGATGTACAGCAGTTTCTCCTCTGTTGATCATATCTgatgttctctgtgtgtgtttgatgatTTGTAGATCCTCATCTGGATAAAGAGCTTCTCTCCC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000103134

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044645 True 1487 mRNA 0.50 4 46030970 46034609

Neighbor

gene id symbol gene type direction distance location
XLOC_022684 SYDE2 coding downstream 10744 46002859 ~ 46020226 (-)
XLOC_022683 MCOLN3 coding downstream 75793 45937468 ~ 45955177 (-)
XLOC_022682 ftr92 coding downstream 133070 45887202 ~ 45897900 (-)
XLOC_022681 NA coding downstream 189391 45834256 ~ 45841579 (-)
XLOC_022680 ednrab coding downstream 325445 45694055 ~ 45705525 (-)
XLOC_022686 ddah1 coding upstream 2075 46036684 ~ 46040618 (-)
XLOC_022687 NA coding upstream 8963 46043572 ~ 46047869 (-)
XLOC_022688 CABZ01071903.1 coding upstream 13609 46048218 ~ 46126444 (-)
XLOC_022689 NA coding upstream 140395 46175004 ~ 46175766 (-)
XLOC_022690 NA coding upstream 144664 46179273 ~ 46181834 (-)
XLOC_022670 NA non-coding downstream 691531 45155043 ~ 45339439 (-)
XLOC_022669 NA non-coding downstream 894338 45128099 ~ 45136632 (-)
XLOC_022666 NA non-coding downstream 995485 45032466 ~ 45035485 (-)
XLOC_022660 CU682777.1 non-coding downstream 1192131 44824083 ~ 44838839 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G342736 NA non-coding CI01000129 null 1288733 ~ 1292004 (-)