XLOC_022690


Basic Information

Item Value
gene id XLOC_022690
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 46179273 ~ 46181834 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00045179
AGGCATTTAAACTTAAGAGTCAGTTTTCTGAGGAGAACGGATAACGGTCCGTCTGAGAAAAATATGCGGAGTTATGGAGTTATTGCGCTGCATTTCTGCTTAAAGCAAACTGTCACGTTCAGGATTTAATGTCAGCCATGTGATTAACACGTCGTCTTTAGTTTACTGAGGAAATTCTCGTCTTCAATCCAGCGTTGATTACCAGAGCTACAGAAGAACAACCGCCGTATCATCAGAAACAGACCAAAACTCTTCAGAAAAGTTGAAGGTAGCTGGACAGGACATGAAATCAAGATCGAGGGGGGATAGGATTGGGAAAGGTCCACAAGCAGGGATTCAAATTCGGGACATGCCTTTCTACACCAATATGCTTTCAGCACATTGCAATTACATAGCAAGGTAAGTTTACATTTGCATAGATTTTGTATAAGTGTGTTGTTTGTAGTATCTGTTTTTCATAAGACATAAGCATATTATTGAGGTTGGTAATTCTAtactgttattatatttattagtgctgtcaaatgattaattaggttttaatttatagtatgtatacacatgcatgcaagcttgaaaaaatgtttattttaagccCCCTTTTTTCTTGGTTCAGGCAGTTCTTGAAATGTTTTCCTTTACtggcaaaaacatttttaactctATATTAGCTCAGCATTGTTTCTCGTTTTGACCAATTTGAGCATCCATAACCAATGCACAACCTAAAAATAGTTCCTATGTAAAATAATCTCTTCCTGGTCTCCATTAGAATTTTGTGTTGCACAatgaaaatttgcaaaaaaatctACAGGCTCATGAAGATGATTCTATTCCATTAGGTTTGTTTCTCACTTTAAATCTGTTTTACAGTCAGCAACAATAATCTTGTAAGCAACACATACGAAACTTGCACACATATGAAAATTGGCACTCACATCAAACATGCTAATAC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00045179 True 955 lncRNA 0.36 2 46179273 46181834

Neighbor

gene id symbol gene type direction distance location
XLOC_022689 NA coding downstream 3507 46175004 ~ 46175766 (-)
XLOC_022688 CABZ01071903.1 coding downstream 52829 46048218 ~ 46126444 (-)
XLOC_022687 NA coding downstream 131404 46043572 ~ 46047869 (-)
XLOC_022686 ddah1 coding downstream 138655 46036684 ~ 46040618 (-)
XLOC_022685 C23H1orf52 coding downstream 144664 46030970 ~ 46034609 (-)
XLOC_022691 tgm1l4 coding upstream 10039 46191873 ~ 46201008 (-)
XLOC_022692 NA coding upstream 26470 46208304 ~ 46217134 (-)
XLOC_022681 NA non-coding downstream 337694 45834256 ~ 45841579 (-)
XLOC_022670 NA non-coding downstream 839834 45155043 ~ 45339439 (-)
XLOC_022669 NA non-coding downstream 1042641 45128099 ~ 45136632 (-)

Expression


Co-expression Network