XLOC_022736


Basic Information

Item Value
gene id XLOC_022736
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 3346366 ~ 3348625 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00046910
GGGATGggcaaagtcggtcctggagggataGAGGGCAGGTTCCATttggaagggctcatccctatgccctaatccctttGTAGGGTCCctctgaaaaaaatctaaacataggGATAAGCCATTCCAAATTTAGTGCAGTGTGTAACACCAAACAGCTTCCCTGCTCAAAAAATCATGGCCGAAAGTGTCCATCAGCTGTATTTCTCAAAATCCTTCATTTCAAATGACCCTTCaaagtggccagttttgagcacttCGGTTTAGAATGACACTTCAATATGGCGACCTTGATTTTTGTTCACTCCGAAGTGCCCTTTGGAGGGAGGTAGATCTAGTTTAGAACGCACTgggagtttagcttcaaccctaatcaaattcACCTGCctgtagatttctagtgatcttgaaaaCATGGATaatcttgttcaggtgtgtttgaatagtgtcaaagcaaaactctgcaggacaatGGTCCTCGAGGACCAAGTTTGCCAAGCCCTAATCTAGGGTGTAATTTGGAGCACTGTCTTGAACAACTTTACTTACACTAAATGACAGAACTCCGACATTACAACTAAATCTCTAAACTAAACTCTGAAAGGTTTTCCACACACTCCCCACCAAAAAAATCCCCATTCCTTAACTCTCACCCCATTCTGACTCCAAGCAGCTGGAGAAGTAATCATGGTCATGGTGATGGTCCCCTGGAGGAGAGCCCAGATCATCACCCTCCTCACGAGTCATAAGAAAAGAACGTTTTTCCAACTTAAAACTGAGACGTGACCAGGGAAGAGTCTATCCCATTGCACGATCCACCAAACATACTTATCTACTTAGTTTTACATGCAGAGATCTGATCCTCGGTGGAACATCTCTGACCGTTTATCATAACCTGATGAAAACTACAGGGAAGCAGCACTTTGGATCTTGATCGCGAATTCAATCCTTCCTTGAAACCTGAGCTTACAATGCTGCCTTCATGATGGCACGCTTTCATTCATACTCTACACTATAATATGTGAGAAAGTCAGCAAGCTAATGAAGAAGGCAAACACCTGACGAAGCTTCAAACCAATATTCCACAACCAATGATAACGAAAACCACATAATATTCACCCCGGTTACATCAAAAGGAAATGTGGCCTTGATCAGGAAAGAAGGCTTTATTAGTAAAACATTAAATCATGAAAGACCTTTTGTGTGCACCAGTGTGGTTTAATCTTCTTTAATCATCAGTCATGGCAATGCAAGGCTCCAATGAAGATGAAGAAACTCCCACGTTCATTCACATAAATGTCTAGCAGAAGACATCAATCACAGCTAAGCCAAAGCAGAGACAGATCATATTTATGGCATAGCATGGATTCTGACAGCTCCAAGATGACAAATTTAGGACTCCATTCTTAAAACTTGCTGACAAACCGCAATAATTGGCATCCGGATTGTTCTGGACGTAGAACTTTCGGATCTTTACTCTTCATAAATATAGACTACAGGCTTAGCTTCAGGTCGGAAACATGCAGCTGCAAGACTTCCGACTTTCGATTACAGTTTAAGTTTAATCCCAAAACGATATCGCTCGCTCGCTTTTATTGTTGGAGCAGAGATATTGATTCCTAATAAATATAGCAGATTACGTCAATTAGGTCTGTGTAGTTCAGGCAATGCAGGCAGTAACAGACAGTATGTGAGACCTTTGGAAAGAAGTTGTCCTTCAGCTGGACtttaaaatgcttgtttttgGACTGAGCTTTCAGCGATAT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00046910 True 1763 lncRNA 0.42 2 3346366 3348625

Neighbor

gene id symbol gene type direction distance location
XLOC_022735 bdh1 coding upstream 9966 3328354 ~ 3336400 (+)
XLOC_022734 gyg1b coding upstream 19997 3307857 ~ 3326369 (+)
XLOC_022733 inhbaa coding upstream 283756 3050020 ~ 3062610 (+)
XLOC_022732 NA coding upstream 374327 2933457 ~ 2972039 (+)
XLOC_022731 si:ch211-152c8.2 coding upstream 481503 2843268 ~ 2864863 (+)
XLOC_022737 NA coding downstream 117855 3466480 ~ 3467322 (+)
XLOC_022738 wdr37 coding downstream 130246 3478871 ~ 3527978 (+)
XLOC_022739 NA coding downstream 185557 3534182 ~ 3538036 (+)
XLOC_022740 NA coding downstream 427281 3775906 ~ 3811797 (+)
XLOC_022741 NA coding downstream 609547 3958172 ~ 3959423 (+)
XLOC_022729 NA non-coding upstream 788139 2555605 ~ 2558227 (+)
XLOC_022724 CABZ01089087.1 non-coding upstream 1543982 1802268 ~ 1802384 (+)
XLOC_022723 NA non-coding upstream 1910406 1431732 ~ 1435960 (+)
XLOC_022722 BX323074.2 non-coding upstream 1947515 1370627 ~ 1398851 (+)
XLOC_022743 CT583636.1 non-coding downstream 710831 4059456 ~ 4059573 (+)

Expression


Co-expression Network