XLOC_022741



Basic Information


Item Value
gene id XLOC_022741
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 3958172 ~ 3959423 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00046790
GTTAGTAAGTAAGCTATCTAGTTAGTCAGTgagataaacaaataaagtaaaataataaacataacagtGAAACGGTAACCCAGTATCAGTTGAAACGCCCCCACATTTTTCCACTGACAGGAACTTCCTTGAGGAATACCAGAAGTTGAGCATCCAAAAAAAAAGAGCATCCGTTTCATTTCTACCTTACCTGACAGGTGTGGTCAGTGTTTTCGGCCTGTTTCACTTTGACCCAGCTTGGCAGGTGTGCATGTGCGGTATAAGGTATAAAAGCCACAGCACAATGTCACATCAGCATCTCAGAGCATCTCAGAAACCCTCACTGGAAAGAAGAAGAACAACAAGAGAAGaAAAATGGCCTGGATTAGaatcgtcatcatcatcagtaTGTTCATCTCATTTCTGCAAGCGCATAAGGAGTGCACCAGACACA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00046790 True 433 lncRNA 0.42 2 3958172 3959423

Neighbor


gene id symbol gene type direction distance location
XLOC_022740 NA coding upstream 146375 3775906 ~ 3811797 (+)
XLOC_022739 NA coding upstream 420136 3534182 ~ 3538036 (+)
XLOC_022738 wdr37 coding upstream 430194 3478871 ~ 3527978 (+)
XLOC_022737 NA coding upstream 490850 3466480 ~ 3467322 (+)
XLOC_022736 NA coding upstream 609547 3346366 ~ 3348625 (+)
XLOC_022742 pfkpa coding downstream 4261 3963684 ~ 4004537 (+)
XLOC_022743 CT583636.1 coding downstream 100033 4059456 ~ 4059573 (+)
XLOC_022744 CU462914.1 coding downstream 195536 4154959 ~ 4156399 (+)
XLOC_022745 ccny coding downstream 413610 4373033 ~ 4424232 (+)
XLOC_022746 BX004842.2 coding downstream 474694 4434117 ~ 4437748 (+)
XLOC_022732 NA non-coding upstream 986133 2933457 ~ 2972039 (+)
XLOC_022747 NA non-coding downstream 545323 4504746 ~ 4508590 (+)
XLOC_022748 NA non-coding downstream 1001550 4960973 ~ 4967249 (+)
XLOC_022760 CR385039.1 non-coding downstream 2104248 6063671 ~ 6063785 (+)

Expression



Co-expression Network