dcp2 (dcp2)


Basic Information

Item Value
gene id dcp2
gene name dcp2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 9782455 ~ 9797823 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036976725.1
CATCATCAACAGTGGCGTTTCTACCTTTCTTTTTCGATTGCGCGGTGTTGGAGTTTGTTTTTAGCGAGCTAACGTAgcttacatgtatttatttgtgtAAGTTTAGGGACATTTGACGAACCTGGCACATATAGTTCGCCTTGATTGATCAATAGAATGCATTGATTCGAGATTTAAGAAAATAGTAGCTTTGCGCTGTTTATTTTTCGCCTCATTGTTTCGCGAGTTCGGGATGTTTTTATCCTCAACATGGAGACAAAAAGAGGGGAGATTCCCAACGGCGTATTGGACGACCTCTGCAGTCGATTCATCCTCCACATCCCTAGTGAAGAGAGAGACAATGCTATCCGCGTGTGCTTCCAGATCGAGCTTGCCCATTGGTTCTACCTGGACTTCTGCATGCAGAATGCACCAGGATTACCTCAGTGCGGGATAAGGGACTTTGCCAAGGCTGTTTTTAATCATTGTCCATTCTTGCTGCCCAATGGGGAGGATGTACAGAAGGTTCTAGAACAGTGGAAGGAATATAAGATGGGTGTTCCAACCTATGGTGCCATTATTCTAGATGAGTCGCTTGACAATGCATTGCTGGTTCAGGGCTATTTGGCCAAGTCAGGGTGGGGCTTTCCAAAGGGAAAAGTCAATGAAGATGAGGCTCCCCATGTTTGTGCTGTACGAGAGGTTATGGAGGAGACGGGTTTCGATATCAAAGATCGCATCTGCAAAGATACGTACATCGAGCAGAAAATCACTGATCAGTTGGCCCGATTGTACATAATACCTGGGGTACCCAAGGAGACGAAGTTCAACCCCAAAACAAGGAAGGAGATAAGGAACATCGAGTGGTTCCCGATTGAGAAACTACCATGTCACAGAAACGACATGACTCCCAAGTCTAAACTTGGACTCGCCCCCAACAAGTTTTTCATGGCCATTCCTTTTGTCAGACCACTCCGAGAATGGATTGCCAAGCGTAAAGGAGAGTCTACAGACAGTGATGAGGATTTTGCATCCAATGGCAGCACTCCATGCAAACCTCTGGACAAAGCACGCTCCAAGCATCGACGGGCCCAGATGTTGCCGGAGGCATCTccaggagaggggtgggggaagcAGAAGCAACCCAAGCCTCTGGGACAGCTGAGCCAATACGAGGTCTCTGAACTCTTGAAAGCCAAGaaagaggagaagagacttCAGCCCAGGAGACTACAGGACAACTTCGACACAGATGCAGCACTGCCATCTGACACGTGCAGCTCCACCAATGGGCAGCAGGTGGTCTGCAACAGCAACTGTGAACACCTCTCCTCCAGGTCCTTCCTCAACTTCAAGTTCGACAGGGAGgccatcatgaaatgctttgactCCTGAAATAGCCAACGGACACCTTGGTCGTGTTCAGTAGGGACCAAAAGGAagtaaatgctttttttttttttttgcttttcgttgtatgccctaatgaacacgaccctggaaTGGCACACTAGCAGATACTTCAGTTCTATGGAAACGGCAGCCCCTCCAACCGTATGGTTGAGATGAAGAGTACTGACCACATGTATAAAAGCCTTCTGTTgtagttttgttgtttttttttgtcaagcacagaAAGGTGAACTTGGTGTCGCTGTTTGTTCATTCAAGCCGAATCCTTACTTTGGGATTCTTAGTAACTTAGTTTCGCTTACAGGAAATCATGCAGTGATGTCAATGGCAAAAAAAAATAGGGATGAACAGTTTGTACTCTTGTGCACAGATCTCTAGTTAGGATTCAGCCCATATGATCCAGATTTACTAAGCATTTGCATCAGGTGCAAATGTTGTACCTGTATTTTTATAGAGGGAATTAATCACTGAAAGTAGTGGGGGGAGGGTTGAAAATACAGGTTCTGAGAAGAATAATGGTAAAGGTAGatttaaaggttaaataaaggtagatAAAGAGTTTTAACTTTGGGGTTTCATCCCCTGTTGACACGAACAAAGCATATGTTTAGTAAATCTGGCCAGTGAGTGAAGTCGGCGCCATAACTTGCCAAGttcagtgttttttttgtttgtgtgtttttttgtctaATTTTAATGGACGACATAGTCCAACTTTGGTCAGTTTCACCTCCTTACCAACTGAGCTCCCGATTTATGTTttagggcagtggttcccaaccaggggtccTAGGACCACTTGGGATATGtggtctatccacagggggtacttgagaagactcaagAGACCATAGGACtgctggtaaaatgcacatgagggggtactcCGGGTAGAGCGAAATTCATTTGCAGTGGTACAGTAaccgaaaaaggttgggaaccacttttttttttgtgtgtatagcTGGTGTGAACTGATCTGAGGCTAAGCACAGAGTATTGTACATTGTGATTCTATGCTTTATCCCCAAAGTCATAGAGCTGGTGTAGATGGTCTTGTACAGGCAGTCATGTTGAATGGCTCAAGCAGTGTCTGCTCCAAGTAGCCTCGTCCTACCAACTGTGATGCCAATGGCCGCGTTCCAGGTCAAGCTTCTTTCTTTTGCAGTCGTGCATCTCAGAAGATTGCTATATGATACGAATGTGGTTTCCACAATGTTAAATGTGATTTTTGCGCAGTACGACTGCAATAAAGACAACCTGGTACGTGTCCTA
>XM_036976724.1
TCATCAACAGTGGCGTTTCTACCTTTCTTTTTCGATTGCGCGGTGTTGGAGTTTGTTTTTAGCGAGCTAACGTAgcttacatgtatttatttgtgtAAGTTTAGGGACATTTGACGAACCTGGCACATATAGTTCGCCTTGATTGATCAATAGAATGCATTGATTCGAGATTTAAGAAAATAGTAGCTTTGCGCTGTTTATTTTTCGCCTCATTGTTTCGCGAGTTCGGGATGTTTTTATCCTCAACATGGAGACAAAAAGAGGGGAGATTCCCAACGGCGTATTGGACGACCTCTGCAGTCGATTCATCCTCCACATCCCTAGTGAAGAGAGAGACAATGCTATCCGCGTGTGCTTCCAGATCGAGCTTGCCCATTGGTTCTACCTGGACTTCTGCATGCAGAATGCACCAGGATTACCTCAGTGCGGGATAAGGGACTTTGCCAAGGCTGTTTTTAATCATTGTCCATTCTTGCTGCCCAATGGGGAGGATGTACAGAAGGTTCTAGAACAGTGGAAGGAATATAAGATGGGTGTTCCAACCTATGGTGCCATTATTCTAGATGAGTCGCTTGACAATGCATTGCTGGTTCAGGGCTATTTGGCCAAGTCAGGGTGGGGCTTTCCAAAGGGAAAAGTCAATGAAGATGAGGCTCCCCATGTTTGTGCTGTACGAGAGGTTATGGAGGAGACGGGTTTCGATATCAAAGATCGCATCTGCAAAGATACGTACATCGAGCAGAAAATCACTGATCAGTTGGCCCGATTGTACATAATACCTGGGGTACCCAAGGAGACGAAGTTCAACCCCAAAACAAGGAAGGAGATAAGGAACATCGAGTGGTTCCCGATTGAGAAACTACCATGTCACAGAAACGACATGACTCCCAAGTCTAAACTTGGACTCGCCCCCAACAAGTTTTTCATGGCCATTCCTTTTGTCAGACCACTCCGAGAATGGATTGCCAAGCGTAAAGGAGAGTCTACAGACAGTGATGAGGATTTTGCATCCAATGGCAGCACTCCATGCAAACCTCTGGACAAAGCACGCTCCAAGCATCGACGGGCCCAGATGTTGCCGGAGGCATCTccaggagaggggtgggggaagcAGAAGCAACCCAAGCCTCTGGGACAGCTGAGCCAATACGAGGTCTCTGAACTCTTGAAAGCCAAGAACCTCAATGTGAAAGGCAATGGGAAGAAGCACCAGGATTCTCCCAACCTGAAGAAAAGAGCCAATGGAGTCGGCAACCAGCAGaaagaggagaagagacttCAGCCCAGGAGACTACAGGACAACTTCGACACAGATGCAGCACTGCCATCTGACACGTGCAGCTCCACCAATGGGCAGCAGGTGGTCTGCAACAGCAACTGTGAACACCTCTCCTCCAGGTCCTTCCTCAACTTCAAGTTCGACAGGGAGgccatcatgaaatgctttgactCCTGAAATAGCCAACGGACACCTTGGTCGTGTTCAGTAGGGACCAAAAGGAagtaaatgctttttttttttttttgcttttcgttgtatgccctaatgaacacgaccctggaaTGGCACACTAGCAGATACTTCAGTTCTATGGAAACGGCAGCCCCTCCAACCGTATGGTTGAGATGAAGAGTACTGACCACATGTATAAAAGCCTTCTGTTgtagttttgttgtttttttttgtcaagcacagaAAGGTGAACTTGGTGTCGCTGTTTGTTCATTCAAGCCGAATCCTTACTTTGGGATTCTTAGTAACTTAGTTTCGCTTACAGGAAATCATGCAGTGATGTCAATGGCAAAAAAAAATAGGGATGAACAGTTTGTACTCTTGTGCACAGATCTCTAGTTAGGATTCAGCCCATATGATCCAGATTTACTAAGCATTTGCATCAGGTGCAAATGTTGTACCTGTATTTTTATAGAGGGAATTAATCACTGAAAGTAGTGGGGGGAGGGTTGAAAATACAGGTTCTGAGAAGAATAATGGTAAAGGTAGatttaaaggttaaataaaggtagatAAAGAGTTTTAACTTTGGGGTTTCATCCCCTGTTGACACGAACAAAGCATATGTTTAGTAAATCTGGCCAGTGAGTGAAGTCGGCGCCATAACTTGCCAAGttcagtgttttttttgtttgtgtgtttttttgtctaATTTTAATGGACGACATAGTCCAACTTTGGTCAGTTTCACCTCCTTACCAACTGAGCTCCCGATTTATGTTttagggcagtggttcccaaccaggggtccTAGGACCACTTGGGATATGtggtctatccacagggggtacttgagaagactcaagAGACCATAGGACtgctggtaaaatgcacatgagggggtactcCGGGTAGAGCGAAATTCATTTGCAGTGGTACAGTAaccgaaaaaggttgggaaccacttttttttttgtgtgtatagcTGGTGTGAACTGATCTGAGGCTAAGCACAGAGTATTGTACATTGTGATTCTATGCTTTATCCCCAAAGTCATAGAGCTGGTGTAGATGGTCTTGTACAGGCAGTCATGTTGAATGGCTCAAGCAGTGTCTGCTCCAAGTAGCCTCGTCCTACCAACTGTGATGCCAATGGCCGCGTTCCAGGTCAAGCTTCTTTCTTTTGCAGTCGTGCATCTCAGAAGATTGCTATATGATACGAATGTGGTTTCCACAATGTTAAATGTGATTTTTGCGCAGTACGACTGCAATAAAGACAACCTGGTACGTGTCCTA

Function

symbol description
dcp2 Predicted to enable m7G(5')pppN diphosphatase activity. Acts upstream of or within mRNA catabolic process. Predicted to be active in P-body. Orthologous to human DCP2 (decapping mRNA 2).

NR:

description
PREDICTED: m7GpppN-mRNA hydrolase isoform X1

GO: NA

KEGG:

id description
K12613 DCP2; mRNA-decapping enzyme subunit 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036976725.1 False 2667 mRNA 0.45 10 9782455 9797823
XM_036976724.1 True 2749 mRNA 0.45 11 9782457 9797823

Neighbor

gene id symbol gene type direction distance location
chd1 chd1 coding upstream 51322 9694048 ~ 9731133 (+)
LOC118964779 NA coding upstream 56890 9725438 ~ 9725565 (+)
LOC118964774 NA coding upstream 70486 9711751 ~ 9711969 (+)
LOC110522837 tmem217 coding upstream 90459 9690509 ~ 9691996 (+)
st8sia4 LOC100135820 coding upstream 104964 9659812 ~ 9677491 (+)
ca9 LOC106571618 coding downstream 12901 9810724 ~ 9834173 (+)
LOC110523166 LOC106571594 coding downstream 72804 9870627 ~ 9874229 (+)
LOC110523169 NA coding downstream 311049 10108872 ~ 10124536 (+)
ankrd55 ankrd55 coding downstream 464882 10262705 ~ 10281350 (+)
gp130 gp130 coding downstream 485177 10283000 ~ 10300246 (+)
G365077 reep5 non-coding upstream 6878 9774865 ~ 9775577 (+)
G365093 NA non-coding upstream 95493 9635188 ~ 9686962 (+)
G365109 NA non-coding upstream 100886 9678974 ~ 9681569 (+)
G364942 pam non-coding upstream 267316 9511683 ~ 9515139 (+)
G365001 NA non-coding upstream 301455 9477926 ~ 9481000 (+)
G365175 NA non-coding downstream 4795 9802618 ~ 9802835 (+)
G365190 NA non-coding downstream 42752 9840575 ~ 9840959 (+)
G365194 NA non-coding downstream 48369 9846192 ~ 9846403 (+)
G365195 NA non-coding downstream 49051 9846874 ~ 9847079 (+)
G364850 NA other upstream 553224 9228838 ~ 9229231 (+)
cdc42se2 cdc42se2 other upstream 936339 8775134 ~ 8849107 (+)
G362662 NA other upstream 1862890 7918922 ~ 7919565 (+)
G362554 NA other upstream 2089941 7690440 ~ 7692514 (+)
G362297 zbtb43 other upstream 2592636 7185926 ~ 7189819 (+)
G365197 NA other downstream 50880 9848703 ~ 9849154 (+)
G366748 NA other downstream 1178859 10976682 ~ 10977152 (+)
G366973 NA other downstream 1627819 11425642 ~ 11428710 (+)
G367684 NA other downstream 2080506 11878329 ~ 11880035 (+)
G368440 NA other downstream 3310873 13108696 ~ 13109134 (+)

Expression


Co-expression Network