XLOC_022889 (C24H8orf34)


Basic Information

Item Value
gene id XLOC_022889
gene name C24H8orf34
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 19210001 ~ 19404475 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00045501
GGCGGGTCTCCAAAACCTGATCAGCCAATGAGTAAACATTGATCTAAGGTGTACTCTTTCTCATTGGCTTTAAGAAGAAGCCGTCGTCAGCTACTCTTCCGAGACCGGAGGAGGGATAGTCCCATCAGATAGTGACCAAACCGAGGAGGAGGACGCGAGCCCTGGTAGTTTGAGCATGTGCTGGATGAGCAGCTGAGCTCTCAGCGCTGGATGTCCGCTCACTGCCCGCTAGACATCCGTCCGCAGTCCCGCGCGCTTGAAGATGCCTGGCGATATTTGACGACATCTCAACGCTTTGCTGTTTAATGCAACACATTCTCATGGCGTCTCTACAGCAGTCAAGAATTCAGTCATACCTGGAGAAGAATAAAATCGGACCCTTGTTTGAGGAGATGATGACCAAGCTGATAACTGAGACACCAGACCACCCCATTCCTTTCCTCATCGGCCATCTGCAAACCAAGCAGGAGAGTCCCGGCAGGATTCAGAGGACGCTGTCGGGATCTGCAGCACTGTGGGCCGAGAGCTCCTCAGAATACAAAGGCACAAGACGGGACTCTAGAGGTTATGAAAAACCCTGGCAGATCCATCCCAAGAAGCCCAAGAAATCAAAGAGTGACCTGGCCGTGTCCAACATTTCCCCACCGTCTCCGGAGTCTAAATCACTGCCTCGTTCAATACTGCGTCCTACTTGGGACTGGAGGACCAAACCAGAGAGTCGAGACTTTGATGAGCTCAATCACATACTGCTGGAGAGCAAGAAGCTTGGCAAAGCTCTAGAGAACCTGTCTCGCAGCATTGCTGTTTCTGATGACTTTGACTTGGACCCTCGGGCGTATAACTCTGTTCTGAGGCCGAGGGTGGTGGGTGAATGGGTTGGCCGTGAGGAGGAAGATTTAGACCCCCTGGCGGCTGAGATGTTTCAGCCACCGGTCCCGAGAGCCAAAACTGAGGGATGGACGAGCAAAGACAATAGTCCTGTTGGAAGCTTGAAAATGGAGACAAAGGGAAAGGGCCTAAAACAGCAGCAACAGAATCACAAGAAACTTCTGGCAGCCATGTTGTCTCAGGACTCATTTGACTCCATGCCTGATTCGGCTCCATCGGTCACTGAAGATGAGATTGAGGATGAGGACGATGCCATGGAGCTGCTGGAGGATCTGGATGACCTGCGGATGGAGGGCGTCACCGGCCTGTTGCAGTCCGGCAGTAAGTTCAGCCAGGGCCGTAGCTCCTACTATACAGAGCCCCAGGCCAAAGTCACTCTCAACATCTGCTCAAGGTGTGCAAGGCTTCAAGGGGACAGTCTAACTGCAAGAACCGAAGAGGAACCAGAACGCCATGTGCCAGAGCAAGCTGTGCCAGAAGTACCTTGTCCATTACCCGCGGTGACAGAAACCCTGACAGCAACAGAAGACCTGCAGACGGCCTCTCAGGTGACAGGGCTGCGTCACCCAGTCTGGGCATCGGATGTGAAGCCCATCAGAGGCACGAGCCCCCAGACGGCCAGACGTGCTCTACAACTCCAGGACTCACTTTTCTCCAAAGAACTGGAAAACATGGGCAAACATCTTGCCGAGGTGGAGAAGGACTTGGCCAAACTGGCAGAGCAAGGCAAGCTGAACCGAAGTCCAAACAGCCCTCACAGGAGTTTACTCTTACCCCCACTCTTCCACACCACCAACACCCTCCCTGTTCTCGGACAGACATCCAGACCACAGTCTCCCAGCAGCCTTTCCTCAAAAACCACAGGCCTGCCGCTTCACAACCCCAAACCCACAAGCCTCATGACAGACCGAACATCGCCCAGTAACTCCAGCAGCAGAGCCCAGACGCCCAGCAGACCCATCACTCCTAATAGTCTAATGATGCGCTCCTTCACTGCCGCTGGCCATGGAAACAAGGAGCGGGTGTACGGCCGATCGAGGAGCAGACCTGTCACACCAACTGGACAGATCACCAGACCGATACTAACACCACCAGGCCTGAGCACCACTGATCTGTATGGAGGTCTGTGGAGCACACTCACTGAGGATGAGTTTTACCAGCAGTTGCAGGCGGTCAGGAAGCCCTGGCGCATTCCTAGTGATGCAGAAAGTGACTGTTTGGACCCTCCTGAGCAGGACAAGTGTAATCCAAGTGGAGTGAGGGATGCCAGCAAGAGATCTGTGTTCTCAGGCTTGTAACGGAGGACACAGAGCCAATCAAACATTTATGCAATTTTAAGGGGCATTTCAGCAAGAgacacttatttttttaattttatccaGAAGAAAGATTGTGTACTTTTTTCCACAGAGGCCAATATTTCATAGAAATAATGTCACAATTCTAGAATGTAATGTGTTTATCAGAAAAAGATAAGCCTGcacttgaacttttttttttttgtctgttagcATGCTTGTTGTCTgttctaaaaaaatatatgaaaatgtatttattgctgCCTTGCATACATAAACACAATTTATCACATAATGTGCCAAATCAAAGGGATTTTTGATAAGCCTTTTCAATAACAACCAACAAGAGTAGGCGTTTTATGGCATTAGCGGATAatataaatgttacaaatgtatgaATAAAGTTGAACATGCACAGCACTGCCCCTGCTGACCTCAGCATGACACTTTCTCATTCCCTATGGAAGGCCAATGAGGTCAATGGtttttaaaagaaatgagttCAATTTGATTGTGTCATCATGTACAGTTTGACTGCATCAATGTGTCAACAAGCACAACAACCAATGAAATTGCTGTATGTGAGACtatatttacatacagtatatgacacAATGGggtgtacatatatacacatcAAATGAGGTGTTGTAAAGTATATTGTAGTAAATTATGCAAAGATCAAATGTCATCTTCCATAAAAAGTGCCACGGCAAAAGTCAAACAGTGCATTTTCATGCAATCAGACTTCACACATTTCTTAAAAGACTTTTGGCCTGATGGCCTTCCGTATTTCCCAACAGCATTGTGTGTCTACAACTGAACACATTTCTATAGAACTTACTTTGAATTTTTTACCCAAAGAAATATATGTAGCCTGTTAAACCTGTTATATCCTTgtataatgcaaaataaacatttatataaagtTGGATTTGTCTGCATTTGTGAAGGTTTTAATACTTGTGCCCAAATGGCCAGTCAAAAGCAAGTGTTTCAGAGGGAATAATACAtgaatctgattggtcagttttacCATCTTTCATGGCAATgtggtatagaccatttcaatgtggtcatgtcattggtccATGAATGTTTCCTGCTTGttaactatttcataactgtaacaagaggaaaTTCAATCATAACGTTATGTTTAGACAGcaattataacattatttatcaatatgtgacgCTTTTTAGATTCTCGGAAGCTctagaaattaaaatgtaaaacaggaaataagtttggaccattgtttttgtttacatccctcaaaatggtctatatcatGTCAGAAATATTGTATTTATGAGCCGAAGACTCACCCCAATGGCATAATTACTATAAATACATTGGGTAcgaaaagtattcagacccccttaaatgtttcactctttgttatattgcagccgtTTACTAAAATCAATAAAGATAATTTTATCTCATTAATATACACACAGCACCCCTTATTGACACCCATATATTTAACTaggtgctgtccatttcttctgatcatccttgaAATGGTTTTACACCttcatttgagtccagctgtgtttgattatgcTGATTAGACTTGATTAGAAAAACCACACACCTGTCTACATAAgaccttacagctcacaatgcatgtcagaACTAATGAGAATCACGAGCTGAAAGGAACtgcctgaagagctcagagacagaattgtggtaaggcacagatctggccaaggttgcaaaaaaaaagaaaaaaaaaaaaaaaaaaaaagttctgctgCACTTACGGTTCctaagagcacagtggcctccataatccTTAAATGGAAGATGTTTGAGACAATCGGAacccttcctagagctggccgtctgacttaaggctgatttatacttctgcgtcaaacaccggcgtatgctacggcgctgacgcatagcccttcgtcgtggccatcgccgtcactaacgtgcacctctcaaaaaatgtaactacacgtcgtaaCGACacgtagcataagctctgtgattggtcggcttggtagcgctgacaagtctcgggcgggaccgagagccgcgcgaatggcgcgacgtcgcgcgagcgattgtttacaagtgtggagtaccgtgaaggagctccggatggaaagttttgttttgtgtttacctcatagttaaagttgttgcacgtccgccggttcctgcctcaaaatgagcgagtttgagccacttgtacatcccggaagtgttcaggaaaagcaaaaaagtagcgaagaaactcgacacagaggaacatttacacctcactgccaactagcgtttcagaagtgttaatgcagaccaacagagacagcgcgcagaagtataaatgcacagccacgcgcgttgcatgcgccgttggttacgccggtcacctgacacagaagtataaatcaggctttaagtGAGCTTTCTGGGGAGAAACCTTGGTGAAAGAGGTAAAGAAGAACCCAAAGATCACTGTGGCTGAGCTGCAGAGATGCAGTCGGGAGATGGGAGAAAGTTGTAGAAAGTCAACCATCACTGCAGTCGTGGCTTTATGGCAGAGTGGCCTGACAGAAGCCTCTTGTTAGTGCAAGACACATGAAAGCCC
>TCONS_00045502
GGAGGACGCGAGCCCTGGTAGTTTGAGCATGTGCTGGATGAGCAGCTGAGCTCTCAGCGCTGGATGTCCGCTCACTGCCCGCTAGACATCCGTCCGCAGTCCCGCGCGCTTGAAGATGCCTGGCGATATTTGACGACATCTCAACGCTTTGCTGTTTAATGCAACACATTCTCATGGCGTCTCTACAGCAGTCAAGAATTCAGTCATACCTGGAGAAGAATAAAATCGGACCCTTGTTTGAGGAGATGATGACCAAGCTGATAACTGAGACACCAGACCACCCCATTCCTTTCCTCATCGGCCATCTGCAAACCAAGCAGGAGAGTCCCGGCAGGATTCAGAGGACGCTGTCGGGATCTGCAGCACTGTGGGCCGAGAGCTCCTCAGAATACAAAGGCACAAGACGGGACTCTAGAGGTTATGAAAAACCCTGGCAGATCCATCCCAAGAAGCCCAAGAAATCAAAGAGTGACCTGGCCGTGTCCAACATTTCCCCACCGTCTCCGGAGTCTAAATCACTGCCTCGTTCAATACTGCGTCCTACTTGGGACTGGAGGACCAAACCAGAGAGTCGAGACTTTGATGAGCTCAATCACATACTGCTGGAGAGCAAGAAGCTTGGCAAAGCTCTAGAGAACCTGTCTCGCAGCATTGCTGTTTCTGATGACTTTGACTTGGACCCTCGGGCGTATAACTCTGTTCTGAGGCCGAGGGTGGTGGGTGAATGGGTTGGCCGTGAGGAGGAAGATTTAGACCCCCTGGCGGCTGAGATGTTTCAGCCACCGGTCCCGAGAGCCAAAACTGAGGGATGGACGAGCAAAGACAATAGTCCTGTTGGAAGCTTGAAAATGGAGACAAAGGGAAAGGGCCTAAAACAGCAGCAACAGAATCACAAGAAACTTCTGGCAGCCATGTTGTCTCAGGACTCATTTGACTCCATGCCTGATTCGGCTCCATCGGTCACTGAAGATGAGATTGAGGATGAGGACGATGCCATGGAGCTGCTGGAGGATCTGGATGACCTGCGGATGGAGGGCGTCACCGGCCTGTTGCAGTCCGGCAGTAAGTTCAGCCAGGGCCGTAGCTCCTACTATACAGAGCCCCAGGCCAAAGTCACTCTCAACATCTGCTCAAGGTGTGCAAGGCTTCAAGGGGACAGTCTAACTGCAAGAACCGAAGAGGAACCAGAACGCCATGTGCCAGAGCAAGCTGTGCCAGAAGTACCTTGTCCATTACCCGCGGTGACAGAAACCCTGACAGCAACAGAAGACCTGCAGACGGCCTCTCAGGTGACAGGGCTGCGTCACCCAGTCTGGGCATCGGATGTGAAGCCCATCAGAGGCACGAGCCCCCAGACGGCCAGACGTGCTCTACAACTCCAGGACTCACTTTTCTCCAAAGAACTGGAAAACATGGGCAAACATCTTGCCGAGGTGGAGAAGGACTTGGCCAAACTGGCAGAGCAAGGCAAGCTGAACCGAAGTCCAAACAGCCCTCACAGGAGTTTACTCTTACCCCCACTCTTCCACACCACCAACACCCTCCCTGTTCTCGGACAGACATCCAGACCACAGTCTCCCAGCAGCCTTTCCTCAAAAACCACAGGCCTGCCGCTTCACAACCCCAAACCCACAAGCCTCATGACAGACCGAACATCGCCCAGTAACTCCAGCAGCAGAGCCCAGACGCCCAGCAGACCCATCACTCCTAATAGTCTAATGATGCGCTCCTTCACTGCCGCTGGCCATGGAAACAAGGAGCGGGTGTACGGCCGATCGAGGAGCAGACCTGTCACACCAACTGGACAGATCACCAGACCGATACTAACACCACCAGGCCTGAGCACCACTGATCTGTATGGAGGTCTGTGGAGCACACTCACTGAGGATGAGTTTTACCAGCAGTTGCAGGCGGTCAGGAAGCCCTGGCGCATTCCTAGTGATGCAGAAAGTGACTGTTTGGACCCTCCTGAGCAGGACAAGTGTGAGTTTTAAACCTCTGACCCGTCTCATTCATTGAAGACATTGTGACATAAAGATTTGAAGGGAAATTTCACTTGTTTACAAACTATTAACAATTCCATTCAATCAGTTACCAAATGTTGCCAACAAAgcaatcattgttttcagccaaAGACACTTTACTTCTATATAAATGAACCTCATCTTAGATTTGGTGGGCATGATTACTGTATGTCGTTCACACTGAACACAAAAATTAAAAGCATGATTAATATCTTGACTACAGACTTAAAATTACTTAACTCAATAAAAAgaatttttgaaaaaca

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000095034

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00045501 False 4801 mRNA 0.46 15 19210001 19404475
TCONS_00045502 True 2290 mRNA 0.51 13 19210148 19388584

Neighbor

gene id symbol gene type direction distance location
XLOC_022888 prex2 coding upstream 2945 18948665 ~ 19207056 (+)
XLOC_022887 NA coding upstream 331021 18876733 ~ 18878980 (+)
XLOC_022886 NA coding upstream 403109 18805156 ~ 18806892 (+)
XLOC_022885 cspp1a coding upstream 477606 18689980 ~ 18732395 (+)
XLOC_022884 NA coding upstream 702135 18485669 ~ 18507866 (+)
XLOC_022890 sulf1 coding downstream 10086 19414561 ~ 19588659 (+)
XLOC_022891 NA coding downstream 187403 19591878 ~ 19697446 (+)
XLOC_022892 NA coding downstream 300240 19704715 ~ 19715224 (+)
XLOC_022893 CU638714.1 coding downstream 458771 19863246 ~ 19868789 (+)
XLOC_022894 LIMD2 coding downstream 581957 19986432 ~ 20010823 (+)
XLOC_022883 NA non-coding upstream 746564 18446689 ~ 18463437 (+)
XLOC_022882 BX927064.1 non-coding upstream 840184 18369702 ~ 18369817 (+)
XLOC_022895 NA non-coding downstream 649995 20054470 ~ 20054958 (+)
XLOC_022896 NA non-coding downstream 656297 20060772 ~ 20077296 (+)
XLOC_022903 CR931724.1 non-coding downstream 1383693 20788168 ~ 20788284 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000018_03315696_03388918 NA coding CI01000018 null 3315696 ~ 3388918 (+)