XLOC_022928


Basic Information

Item Value
gene id XLOC_022928
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 22068856 ~ 22071276 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00046970
tattTTTGttgttttaactttttattacaGTGCTCGCAATGAGAGTATTTAAAGTCCCCTGCTTTTTATTCGCCACAAATTTCTACAATTATTCCTGGTTGAATGGCTGTCATGAACAGCTCAAAACAGCATGAAAACAAACTACCTTTTAagttaattttcattttgtttcagtgtactttatgtatatttaataaagagGGATActttacacatacagttgaagtcagaattattagccccccttcggatttttttctttttttaaatatttgccaaataatgtttaacagagtaaggacattttcacagtatgtctgataatatgcatatatatttttctggagaaagtcttattcgttttatttcggctagaataaaagcagtttttaattttttaaatcccattttaaggtcaaaattattagctcctttaagctatattttttcaatagtctacagaacaaatcattgttatacaataaccttcgtaattaccctaacctgcccagatAACCgtattaacctagataagcctttaaatgtcactttaagctgtatagaagtgtcttgaaaaatatctattcaaaaaaaagaaaaaaaaaatcaaatattatttactaataattctgataataattactaataattctgactttaaatgtatattaagATCAATTATGCATTGTATGTGCTTTATTTTTAGCACTTATTTTCTTTGTGAAGTGCAATTCAATAATATGAATGCTTTGAAGAAAACTATTGAAATTGTTTTATTCAGTCTATAGGCAAATTTCTGAAATAAATTCAACCTGGACCACTAAACACAGACCGCATTTCAGCTCAGCATTTTAACACTAATCTGCCAAAGCACCGATATTTTCATGTAATGCAATTCTGGctcaaaaaaaaagtgtctttaaGAGCAAAGGCGTGCGTGGTTTTATATTAACTCTTTATTCAGATATCAGATAGCCACACCTAGTACCTAATGC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00046970 True 995 lncRNA 0.29 2 22068856 22071276

Neighbor

gene id symbol gene type direction distance location
XLOC_022927 ankrd33ba coding upstream 9055 22039964 ~ 22059801 (+)
XLOC_022926 ropn1l coding upstream 37777 22021675 ~ 22031079 (+)
XLOC_022925 sat1b coding upstream 90012 21973929 ~ 21978844 (+)
XLOC_022924 NA coding upstream 184884 21882945 ~ 21883972 (+)
XLOC_022923 pan3 coding upstream 320156 21720304 ~ 21748700 (+)
XLOC_022929 BX005378.1 coding downstream 385568 22456844 ~ 22456961 (+)
XLOC_022930 si:dkey-40h20.1 coding downstream 414434 22485710 ~ 22488740 (+)
XLOC_022931 NA coding downstream 653048 22724324 ~ 22737860 (+)
XLOC_022932 si:dkey-7n6.2 coding downstream 688175 22759451 ~ 22769996 (+)
XLOC_022933 CR361560.1 coding downstream 1018113 23089389 ~ 23089505 (+)
XLOC_022919 AL929009.2 non-coding upstream 439016 21629725 ~ 21629840 (+)
XLOC_022915 AL929009.1 non-coding upstream 566287 21501859 ~ 21502569 (+)
XLOC_022913 NA non-coding upstream 760842 21307567 ~ 21308014 (+)
XLOC_022912 CU915780.1 non-coding upstream 796128 21272612 ~ 21272728 (+)
XLOC_022935 NA non-coding downstream 1158769 23230045 ~ 23230743 (+)
XLOC_022936 NA non-coding downstream 1170976 23242252 ~ 23252284 (+)

Expression


Co-expression Network