XLOC_022929 (BX005378.1)


Basic Information

Item Value
gene id XLOC_022929
gene name BX005378.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 22456844 ~ 22456961 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00045572
TCttatggccacagccatatcaccctgcagcccatgaCTGGTTACTCATTGATGCTAAGCAGGGCTGGTTAGTACCTAGAAAGGGAGACCACATGTGAAAACTAGGTTGCTATTGGAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000086010

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00045572 True 118 rRNA 0.47 1 22456844 22456961

Neighbor

gene id symbol gene type direction distance location
XLOC_022928 NA coding upstream 385568 22068856 ~ 22071276 (+)
XLOC_022927 ankrd33ba coding upstream 397043 22039964 ~ 22059801 (+)
XLOC_022926 ropn1l coding upstream 425765 22021675 ~ 22031079 (+)
XLOC_022925 sat1b coding upstream 478000 21973929 ~ 21978844 (+)
XLOC_022924 NA coding upstream 572872 21882945 ~ 21883972 (+)
XLOC_022930 si:dkey-40h20.1 coding downstream 28749 22485710 ~ 22488740 (+)
XLOC_022931 NA coding downstream 267363 22724324 ~ 22737860 (+)
XLOC_022932 si:dkey-7n6.2 coding downstream 302490 22759451 ~ 22769996 (+)
XLOC_022933 CR361560.1 coding downstream 632428 23089389 ~ 23089505 (+)
XLOC_022934 pex2 coding downstream 745584 23202545 ~ 23214258 (+)
XLOC_022919 AL929009.2 non-coding upstream 827004 21629725 ~ 21629840 (+)
XLOC_022915 AL929009.1 non-coding upstream 954275 21501859 ~ 21502569 (+)
XLOC_022913 NA non-coding upstream 1148830 21307567 ~ 21308014 (+)
XLOC_022935 NA non-coding downstream 773084 23230045 ~ 23230743 (+)
XLOC_022936 NA non-coding downstream 785291 23242252 ~ 23252284 (+)
XLOC_022940 NA non-coding downstream 1287408 23744369 ~ 23747511 (+)

Expression


Co-expression Network