Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110522885 |
| gene name | LOC106560352 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 73188025 ~ 73188938 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| proteasome subunit beta type-5-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036976526.1 | True | 830 | mRNA | 0.58 | 2 | 73188025 | 73188938 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524524 | LOC100194696 | coding | downstream | 7136 | 73174706 ~ 73180889 (-) |
| LOC110524523 | LOC106560237 | coding | downstream | 24594 | 73132102 ~ 73163431 (-) |
| LOC110524520 | LOC106560236 | coding | downstream | 78122 | 73106039 ~ 73109903 (-) |
| LOC110524518 | LOC106560233 | coding | downstream | 125611 | 73051611 ~ 73062414 (-) |
| LOC110524517 | LOC106560232 | coding | downstream | 177624 | 73005255 ~ 73010401 (-) |
| LOC100135942 | LOC106560239 | coding | upstream | 18922 | 73207860 ~ 73218158 (-) |
| LOC110524526 | LOC106584218 | coding | upstream | 181501 | 73370439 ~ 73421683 (-) |
| LOC110524527 | LOC106560250 | coding | upstream | 242625 | 73431563 ~ 73444514 (-) |
| LOC110524532 | LOC106560246 | coding | upstream | 368435 | 73557373 ~ 73574822 (-) |
| LOC110524534 | LOC106560249 | coding | upstream | 390961 | 73579899 ~ 73583099 (-) |
| G437075 | NA | non-coding | downstream | 61661 | 73125420 ~ 73126364 (-) |
| G437073 | LOC106567308 | non-coding | downstream | 65998 | 73121401 ~ 73122027 (-) |
| G437069 | NA | non-coding | downstream | 73173 | 73114613 ~ 73114852 (-) |
| G437067 | NA | non-coding | downstream | 74296 | 73113458 ~ 73113729 (-) |
| G437318 | NA | non-coding | upstream | 251306 | 73440244 ~ 73440536 (-) |
| G437660 | LOC106560248 | non-coding | upstream | 297729 | 73486667 ~ 73488455 (-) |
| G437680 | cc2d2a | non-coding | upstream | 342670 | 73531608 ~ 73532196 (-) |
| G437705 | NA | non-coding | upstream | 405156 | 73594094 ~ 73594489 (-) |
| G437703 | NA | non-coding | upstream | 408439 | 73597377 ~ 73598010 (-) |
| G437079 | NA | other | downstream | 40897 | 73146358 ~ 73147128 (-) |
| G437074 | NA | other | downstream | 62987 | 73122112 ~ 73125038 (-) |
| G437054 | NA | other | downstream | 92689 | 73094794 ~ 73095336 (-) |
| G436873 | NA | other | downstream | 412157 | 72774561 ~ 72775868 (-) |
| G436847 | NA | other | downstream | 515199 | 72672154 ~ 72672826 (-) |
| G439002 | NA | other | upstream | 1676321 | 74865259 ~ 74927797 (-) |
| LOC110523004 | NA | other | upstream | 1774522 | 74961377 ~ 74968484 (-) |
| G439594 | NA | other | upstream | 2074535 | 75263473 ~ 75265403 (-) |
| G439788 | LOC106560295 | other | upstream | 2382311 | 75571249 ~ 75575569 (-) |
