LOC110523017 (LOC105011947)


Basic Information

Item Value
gene id LOC110523017
gene name LOC105011947
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 81932984 ~ 82130511 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036979070.1
ATGGAGGAAATTCCGTTTGAAAGAGTCCAGACCCGGAAGGAGGGTCACTGTCCGGCCGCCACCGGTACAACCATCGCTGCCGTTGCTTGCGAGGACGAGTTCGACAGCAAAGAGCTCGAGACGCTCTTCCAAAACTACAACCTGAAGCTAGAGCAGACGGCAACGCTCAAAGCCCTCGCGGTGCTCATCGTGGCCGCCTCGTCCCTCGCGCTGATGGAGCTTCTGTCCGGTCCCCGGCTCACGGTGTCCAAGGGCTCTCACCCGGTGCACAGCGTAGTGTTCGTCTCTCTCTTTATAGTCACCAACGTCAAGTACCTGCAAGTGACGCAGCTGCAGCAGATCGCCAAGCTCGCGCTGCTCTTCAGCTTCACCTTCGCGCTCCTCTGCTGCCCGTTCCCCCTTGCGCTTGGCGCCGCCGGCGTGGGGGCTCCCCCCGCACCGGAGCAAGGCGTGTGGCAGCTCATGCTGGTCACTCTCGTGGCATACGTGCTGCTCCCGGTGCGGACGCTGCTCGCAGTGCTGTTTGGTATGATGGTGGCCGTTTCCCACTTCATCGTCACGGCGACATCAGTCACGGCCAGAAAACACAAGCTCTGGAGACCGCTGGTGGCCAATGCTGTACTATTCACCAGTGTCAACCTGTCTGGAGTCTTTGTCAGGGTGCTGACTGAGCGTGCTCAAAGGAAGGTCTTTCTTCAGGCTAGGAGCTGCATAGAGGAAAGGCTACGACTAGAGGATGAGAATGAGaagcagGAGCGCCTCCTGATGAGCCTGTTGCCCAGGAACGTTGCCATGGAGATGAAGGAGGACTTCCTGAAGCCGCCCGAGAGGATCTTTCATAAGATCTACATCCAGCGTCATGACAACGTCAGTATTTTGTTTGCAGACATCGTGGGGTTTACCAGTCTGGCGTCTCAGTGTACTGCCCAGGAACTGGTCAAACTGCTCAACGAACTCTTCGGGAAGTTTGACGAGCTGGCCACAgAGAACCACTGTAGGCGTATAAAGATTCTGGGGGACTGTTACTACTGTGTGTCAGGTCTGACCCAACCCAAGGCAGACCATGCACACTGTTGTGTagagatgggcctggacatgatCGACACTATCACGTCTGTGGTGGAGGCTACAGAGGTGGATCTGAACATGCGTGTGGGTCTGCACACGGGCCGTGTACTCTGTGGGGTTCTGGGACTCCGGAAGTGGCAGTATGATGTCTGGTCCAATGATGTCACTCTGGCCAATGTGATGGAGGCAGGAGGACTGCCTGGtaAGGTCCACATAACCAGGACTACTCTAGAGTGTTTGAATGGAGACTATGAGGTGGAGCCTGGCTTTGGCCATGATCGACATACCTTCCTACAGAAACACAACATTGAGACCTTCTTCATAGTACCCTCCCACAGGCGAAAgaTCTTCCCAGGGTTGATCCTGTCGGATATCAAGCCAGCCAAGAAGATGAAGTTTAAGACAGTGTGCTACCTGCTGGTTCAGCTCATGCACTGTAGGAAGATGTTCAAGGCGGAGATCCCCTTCTCTAACGTCATGACCTGCGACGACGatgacaagAGGCGTGCGTTGCGGACGGCATCGGAGAAGGTGCGTAGCCGGACGTCGTTCTCGGGCTCCGTGCAGCACCCGCCTGGTACACGGGTTAACCGCTACATTGGCCGGCTAATCGAGGCTCGTCAGACAGACTCACAGACCACCGACCTCAACTTCATCACACTCAcctacaggaacacagacagggaGCGCAGGGTatgtagagtacacacacacacacac

Function

NR:

description
PREDICTED: adenylate cyclase type 1 isoform X2

GO: NA

KEGG:

id description
K08041 ADCY1; adenylate cyclase 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036979070.1 True 1788 mRNA 0.56 9 81932984 82130511

Neighbor

gene id symbol gene type direction distance location
LOC110523016 LOC106560408 coding upstream 12478 81892826 ~ 81920506 (+)
LOC110524668 LOC106560365 coding upstream 107288 81781102 ~ 81825696 (+)
bphl bphl coding upstream 298805 81625006 ~ 81634179 (+)
LOC110524662 exoc2 coding upstream 357589 81417392 ~ 81575395 (+)
gmds gmds coding upstream 702304 80974166 ~ 81230680 (+)
LOC118964728 LOC106560395 coding downstream 9319 82139830 ~ 82141500 (+)
LOC118936420 LOC106560395 coding downstream 11273 82141784 ~ 82149709 (+)
igfbp1a LOC101268901 coding downstream 87961 82218472 ~ 82220496 (+)
LOC110523018 LOC106560398 coding downstream 411026 82541537 ~ 82600595 (+)
c5h8orf82 cssa10h8orf82 coding downstream 475645 82606156 ~ 82629774 (+)
G446385 NA non-coding upstream 23764 81902949 ~ 81909220 (+)
G446357 LOC106560364 non-coding upstream 84717 81847047 ~ 81848267 (+)
G446325 slc22a23 non-coding upstream 165414 81766459 ~ 81767570 (+)
G446321 NA non-coding upstream 172759 81759958 ~ 81760225 (+)
G446317 NA non-coding upstream 184410 81748371 ~ 81748574 (+)
G446513 NA non-coding downstream 26301 82156812 ~ 82158416 (+)
G446514 NA non-coding downstream 28186 82158697 ~ 82160896 (+)
G446515 NA non-coding downstream 33393 82163904 ~ 82165461 (+)
G446535 NA non-coding downstream 59764 82190275 ~ 82190584 (+)
G446549 NA non-coding downstream 81151 82211662 ~ 82211876 (+)
G446381 NA other upstream 35203 81895804 ~ 81897781 (+)
G445211 NA other upstream 1697556 80234880 ~ 80235428 (+)
G445204 NA other upstream 1715894 80216478 ~ 80217090 (+)
LOC110524622 LOC106560333 other upstream 3674528 78245839 ~ 78288092 (+)
G442273 NA other upstream 4349757 77558330 ~ 77583227 (+)
G447001 NA other downstream 293687 82424198 ~ 82442223 (+)
G447020 NA other downstream 322095 82452606 ~ 82458383 (+)
LOC110524684 NA other downstream 1658507 83788574 ~ 83794357 (+)
G448698 NA other downstream 2171589 84302100 ~ 84302473 (+)
LOC118964674 NA other downstream 2257582 84386803 ~ 84389601 (+)

Expression


Co-expression Network