Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110523016 |
| gene name | LOC106560408 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 81892826 ~ 81920506 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: NAD-dependent protein deacylase sirtuin-5, mitochondrial-like |
| id | name | namespace |
|---|---|---|
| GO:0036047 | peptidyl-lysine demalonylation | biological_process |
| GO:0036049 | peptidyl-lysine desuccinylation | biological_process |
| GO:0036054 | protein-malonyllysine demalonylase activity | molecular_function |
| GO:0036055 | protein-succinyllysine desuccinylase activity | molecular_function |
| GO:0070403 | NAD+ binding | molecular_function |
| id | description |
|---|---|
| K11415 | SIRT5, SIR2L5; NAD+-dependent protein deacetylase sirtuin 5 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC110523016 | True | 476 | mRNA | 0.58 | 5 | 81892826 | 81920506 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524668 | LOC106560365 | coding | upstream | 67130 | 81781102 ~ 81825696 (+) |
| bphl | bphl | coding | upstream | 258647 | 81625006 ~ 81634179 (+) |
| LOC110524662 | exoc2 | coding | upstream | 317431 | 81417392 ~ 81575395 (+) |
| gmds | gmds | coding | upstream | 662146 | 80974166 ~ 81230680 (+) |
| mylk4b | LOC106560377 | coding | upstream | 949288 | 80874015 ~ 80943538 (+) |
| LOC110523017 | LOC105011947 | coding | downstream | 12478 | 81932984 ~ 82130511 (+) |
| LOC118964728 | LOC106560395 | coding | downstream | 219324 | 82139830 ~ 82141500 (+) |
| LOC118936420 | LOC106560395 | coding | downstream | 221278 | 82141784 ~ 82149709 (+) |
| igfbp1a | LOC101268901 | coding | downstream | 297966 | 82218472 ~ 82220496 (+) |
| LOC110523018 | LOC106560398 | coding | downstream | 621031 | 82541537 ~ 82600595 (+) |
| G446357 | LOC106560364 | non-coding | upstream | 44559 | 81847047 ~ 81848267 (+) |
| G446325 | slc22a23 | non-coding | upstream | 125256 | 81766459 ~ 81767570 (+) |
| G446321 | NA | non-coding | upstream | 132601 | 81759958 ~ 81760225 (+) |
| G446317 | NA | non-coding | upstream | 144252 | 81748371 ~ 81748574 (+) |
| G446316 | NA | non-coding | upstream | 146735 | 81745891 ~ 81746091 (+) |
| G446405 | NA | non-coding | downstream | 15673 | 81936179 ~ 81936412 (+) |
| G446406 | NA | non-coding | downstream | 18687 | 81939193 ~ 81939466 (+) |
| G446411 | NA | non-coding | downstream | 23759 | 81944265 ~ 81944489 (+) |
| G446413 | NA | non-coding | downstream | 27173 | 81947679 ~ 81947906 (+) |
| G446414 | NA | non-coding | downstream | 30935 | 81951441 ~ 82072880 (+) |
| G445211 | NA | other | upstream | 1657398 | 80234880 ~ 80235428 (+) |
| G445204 | NA | other | upstream | 1675736 | 80216478 ~ 80217090 (+) |
| LOC110524622 | LOC106560333 | other | upstream | 3634370 | 78245839 ~ 78288092 (+) |
| G442273 | NA | other | upstream | 4309599 | 77558330 ~ 77583227 (+) |
| G441903 | NA | other | upstream | 4624060 | 77268212 ~ 77268766 (+) |
| G447001 | NA | other | downstream | 503692 | 82424198 ~ 82442223 (+) |
| G447020 | NA | other | downstream | 532100 | 82452606 ~ 82458383 (+) |
| LOC110524684 | NA | other | downstream | 1868512 | 83788574 ~ 83794357 (+) |
| G448698 | NA | other | downstream | 2381594 | 84302100 ~ 84302473 (+) |
| LOC118964674 | NA | other | downstream | 2467587 | 84386803 ~ 84389601 (+) |
