G365218


Basic Information

Item Value
gene id G365218
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 9870868 ~ 9871159 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU415190
GATACCATCCActcagtaatgagtggtgagaaaTACATTTGACACCCACAGAAACGGAAACTCTCCTCTCAACAGTTACAACAGTAATTGcattaaaaacattgtatttctGGTCGGTTGTATTTTGGAAATGTTGCACAACCGTGTGCTTGAGTTTCAGAACGCATCCATGCTTGGCCTATATCTCGAAGAAAACTAACTACAAAGGTCAAGGTGATGGTGGAAGCGGAACCACTGAGTTGGATGGTGCGTTGAGGAAAGTTAAGGGAAATTAGTGGAAAACTAACATGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU415190 True 292 lncRNA 0.42 1 9870868 9871159

Neighbor

gene id symbol gene type direction distance location
ca9 LOC106571618 coding upstream 36695 9810724 ~ 9834173 (+)
dcp2 dcp2 coding upstream 73045 9782455 ~ 9797823 (+)
chd1 chd1 coding upstream 139735 9694048 ~ 9731133 (+)
LOC110523169 NA coding downstream 237713 10108872 ~ 10124536 (+)
ankrd55 ankrd55 coding downstream 391546 10262705 ~ 10281350 (+)
gp130 gp130 coding downstream 411841 10283000 ~ 10300246 (+)
slc38a9 slc38a9 coding downstream 470073 10341232 ~ 10366701 (+)
LOC110523175 LOC106571461 coding downstream 530936 10402095 ~ 10420627 (+)
G365205 NA non-coding upstream 12748 9854746 ~ 9858120 (+)
G365202 NA non-coding upstream 19516 9851143 ~ 9851352 (+)
G365196 NA non-coding upstream 22576 9848080 ~ 9848292 (+)
G365195 NA non-coding upstream 23789 9846874 ~ 9847079 (+)
G365194 NA non-coding upstream 24465 9846192 ~ 9846403 (+)
G365223 NA non-coding downstream 7372 9878531 ~ 9878767 (+)
G365199 NA non-coding downstream 8103 9879262 ~ 9881261 (+)
G365198 NA non-coding downstream 14155 9885314 ~ 9911145 (+)
G365233 NA non-coding downstream 40226 9911385 ~ 9911700 (+)
G365235 NA non-coding downstream 40862 9912021 ~ 9913862 (+)
G365197 NA other upstream 21714 9848703 ~ 9849154 (+)
G364850 NA other upstream 641637 9228838 ~ 9229231 (+)
cdc42se2 cdc42se2 other upstream 1024752 8775134 ~ 8849107 (+)
G362662 NA other upstream 1951303 7918922 ~ 7919565 (+)
G362554 NA other upstream 2178354 7690440 ~ 7692514 (+)
G366748 NA other downstream 1105523 10976682 ~ 10977152 (+)
G366973 NA other downstream 1554483 11425642 ~ 11428710 (+)
G367684 NA other downstream 2007170 11878329 ~ 11880035 (+)
G368440 NA other downstream 3237537 13108696 ~ 13109134 (+)
G369763 NA other downstream 3894088 13765247 ~ 13769296 (+)

Expression


Co-expression Network