G374710


Basic Information

Item Value
gene id G374710
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 18505206 ~ 18506092 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU425994
aaagaaagaagtaAACTAACTATTGTAGCTCTATGAAATAAGCACAAGGAATTCTAacttaaatacataaatacagatGTCCATGCGAACCCCACCATGGGGGCTCTGACAGTGGACTGATGTGAACCTAAAACATGGAAACCAGATACTTCAGAGTGAAATTGGCAGTTTGAACTTCGACTCTCAGGTAATGTGCTAATGGTAGAATGAGGCCCCTGTAACCGTCACAGGTGGTGATGCTATATGCTCTTCTATGTCTCCGTAATGCAGCAATGACATGAAATTATGCTGTTAGGAGTGAAGGAAAGGGACACTTAAAAGGGTTGTATGTGTCACTGACATAGCACATGACAGGGTTGCCCATCATAGAGCTAGTGTTCGAGTTAGCCTTTGGGCTGGTATAGGAACAGGAATACACAAACACTGAGTAGGCCTATGTTCTGCTAATGTTCATCCTCCCATATCGCTGAGCTGGGGCATTCATTTCTATTGTTATTGTGTTGTGGACTCAGACTTGTGTGGAGATATCTGGTTGGTGAGGGTGACCCAGTCCTGTTGTTTCTAATTCTCTTGGCAGGAACAGGTTCCGAGGCGTTCCTCGAGGAAGCCGACCTGTTCGCTGAGCGAGTCGATGCGATCCAGCTGCTGGAAGGAGTGGGACAGGAAGCTGGTTTTCTCAGACACGCCCTCGTCCAGCGACATGGGGAACAGACTGGTGAAAGGGGCCAGGACCAACTGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU425994 True 739 lncRNA 0.47 2 18505206 18506092

Neighbor

gene id symbol gene type direction distance location
enc1 LOC106568903 coding downstream 107868 18383114 ~ 18397338 (-)
ankra2 LOC106569021 coding downstream 445236 18052970 ~ 18059970 (-)
foxd1 LOC106569011 coding downstream 470565 18032820 ~ 18034641 (-)
LOC110523358 NA coding downstream 645609 17857501 ~ 17859597 (-)
LOC110523355 mol1a coding downstream 782603 17714649 ~ 17722603 (-)
LOC110523369 LOC106568861 coding upstream 217 18506309 ~ 18539569 (-)
LOC118964773 NA coding upstream 74177 18578378 ~ 18581454 (-)
LOC110523371 LOC106568849 coding upstream 81518 18587610 ~ 18589578 (-)
LOC110523372 LOC106568827 coding upstream 83562 18589654 ~ 18599366 (-)
LOC118964544 LOC106568982 coding upstream 236426 18742518 ~ 18743532 (-)
G374759 NA non-coding downstream 20808 18484098 ~ 18484398 (-)
G374758 NA non-coding downstream 24064 18480938 ~ 18481142 (-)
G374757 NA non-coding downstream 26087 18478884 ~ 18479119 (-)
G374740 NA non-coding downstream 48037 18456945 ~ 18457169 (-)
G374738 NA non-coding downstream 50586 18454387 ~ 18454620 (-)
G374786 NA non-coding upstream 52147 18558140 ~ 18559167 (-)
G374788 NA non-coding upstream 54431 18560523 ~ 18560808 (-)
G374790 NA non-coding upstream 56032 18562124 ~ 18562497 (-)
G374852 NA non-coding upstream 161801 18667893 ~ 18698250 (-)
G374189 NA other downstream 502036 18002820 ~ 18003170 (-)
LOC110523354 LOC106569496 other downstream 983719 17483696 ~ 17521507 (-)
G373228 LOC106569424 other downstream 1379399 17124037 ~ 17125807 (-)
LOC110523341 LOC106569324 other downstream 1563015 16909582 ~ 16942359 (-)
G372123 NA other downstream 2523991 15978502 ~ 15981215 (-)
G377800 NA other upstream 2188004 20694096 ~ 20694708 (-)
G377809 LOC106568602 other upstream 2198521 20704613 ~ 20705140 (-)
G377991 NA other upstream 2523366 21029458 ~ 21029783 (-)
G378359 NA other upstream 3285570 21791662 ~ 21791993 (-)

Expression


Co-expression Network