G374786


Basic Information

Item Value
gene id G374786
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 18558140 ~ 18559167 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU426081
CTTGTGTATACAAGAAATGAATACCACGGATGTATATCACTCAAATCTTTCCAACATTGATATTCAATAGCACCCGTGTCCATAAGGAAAATAGCCTGGTGTCAACTTTGTGCAGACAAAATCAAATCAATACAATGGTATATTGTGTTATTACCTAATTAGAAGTCTATGGTTTAGCAATTTACTGACAAATAGAGAGAGCTAGAATACTCTTATTTGTAACGATCTGATGGCATATAGGGCACAAAAACGCAGCCAAATCTCAGCTAGTGGTCCCACCTGCAGCCCCTTCGACATAGGGCAAAACAGCACCAGGTGCACGAGCCTCCGTAAACCTCTGGGCATCATAAGCGATTCCGTTAGTAGAACGCGCTCGGGCTGGAACGGCAAATCACTGAACCGTATTCCCGTCGAGACACATCCATGGGACCAGCATCTCCAGTCTGAGCATACTAAACTGACGTCACCTGTTCACCCCTATGGCATTCAGTTTTGTGCGCATTTATCGTTCGAGATTTGCATGTGGAGCAAAGATCCTTTATGAAAATAAAAGACAAAATCTAAACAGTCCAGAGCCACAGTGAGTCAGGTCAGCGAGAAAGTGGGCATCGTTTCATAATCCAATTTCATACACAAACAACGCCATTCGGTTTGCAGAAATTCATAGCCTTCCTAAGCTTTCAGACGTCATTGGGGAAAAATACAAAGTGGAGCTATGTTCCCTTCACAACATGCAGACTGACATTCTGAGCACATGTTTTCAGCTGCCTAGGCGCCATCGGTTAGGATATTAATGTTGACTGAAAAATCCTGTCCGACTCCTCCGTTTCAAAAAAAACATTATTCAATACGCTACTAGTCTACCCCTTCTGACTCTACGAACGAACTCTCATAACAGCAAGAGCCAATATTGGCCTGACCTGAAAATGTGGTCGGAGCCACTAAATGGATGGTGTGACGCAATCGCGGAGCATCCGGAGGAGGCacgcagaggccaaattgagctctgtaCCACATCGCCGTACGCC
>TU426077
CATAGGGCAAAACAGCACCAGGTGCACGAGCCTCCGTAAACCTCTGGGCATCATAAGCGATTCCGTTAGTAGAACGCGCTCGGGCTGGAACGGCAAATCACTGAACCGTATTCCCGTCGAGACACATCCATGGGACCAGCATCTCCAGTCTGAGCATACTAAACTGACGTCACCTGTTCACCCCTATGGCATTCAGTTTTGTGCGCATTTATCGTTCGAGATTTGCATGTGGAGCAAAGATCCTTTATGAAAATAAAAGACAAAATCTAAACAGTCCAGAGCCACAGTGAGTCAGGTCAGCGAGAAAGTGGGCATCGTTTCATAATCCAATTTCATACACAAACAACGCCATTCGGTTTGCAGAAATTCATAGCCTTCCTAAGCTTTCAGACGTCATTGGGGAAAAATACAAAGTGGAGCTATGTTCCCTTCACAACATGCAGACTGACATTCTGAGCACATGTTTTCAGCTGCCTAGGCGCCATCGGTTAGGATATTAATGTTGACTGAAAAATCCTGTCCGACTCCTCCGTTTCAAAAAAAACATTATTCAATACGCTACTAGTCTACCCCTTCTGACTCTACGAACGAACTCTCATAACAGCAAGAGCCAATATTGGCCTGACCTGAAAATG
>TU426078
ACCTCTGGGCATCATAAGCGATTCCGTTAGTAGAACGCGCTCGGGCTGGAACGGCAAATCACTGAACCGTATTCCCGTCGAGACACATCCATGGGACCAGCATCTCCAGTCTGAGCATACTAAACTGACGTCACCTGTTCACCCCTATGGCATTCAGTTTTGTGCGCATTTATCGTTCGAGATTTGCATGTGGAGCAAAGATCCTTTATGAAAATAAAAGACAAAATCTAAACAGTCCAGAGCCACAGTGAGTCAGGTCAGCGAGAAAGTGGGCATCGTTTCATAATCCAATTTCATACACAAACAACGCCATTCGGTTTGCAGAAATTCATAGCCTTCCTAAGCTTTCAGACGTCATTGGGGAAAAATACAAAGTGGAGCTATGTTCCCTTCACAACATGCAGACTGACATTCTGAGCACATGTTTTCAGCTGCCTAGGCGCCATCGGTTAGGATATTAATGTTGACTGAAAAATCCTGTCCGACTCCTCCGTTTCAAAAAAAACATTATTCAATACGCTACTAGTCTACCCCTTCTGACTCTACGAACGAACTCTCATAACAGCAAGAGCCAATATTGGCCTGACCTGAAAATG
>TU426079
CTTGTGTATACAAGAAATGAATACCACGGATGTATATCACTCAAATCTTTCCAACATTGATATTCAATAGCACCCGTGTCCATAAGGAAAATAGCCTGGTGTCAACTTTGTGCAGACAAAATCAAATCAATACAATGGTATATTGTGTTATTACCTAATTAGAAGTCTATGGTTTAGCAATTTACTGACAAATAGAGAGAGCTAGAATACTCTTATTTGTAACGATCTGATGGCATATAGGGCACAAAAACGCAGCCAAATCTCAGCTAGTGGTCCCACCTGCAGCCCCTTCGACATAGGGCAAAACAGCACCAGGTGCACGAGCCTCCGTAAACCTCTGGGCATCATAAGCGATTCCGTTAGTAGAACGCGCTCGGGCTGGAACGGCAAATCACTGAACCGTATTCCCGTCGAGACACATCCATGGGACCAGCATCTCCAGTCTGAGCATACTAAACTGACGTCACCTGTTCACCCCTATGGCATTCAGTTTTGTGCGCATTTATCGTTCGAGATTTGCATGTGGAGCAAAGATCCTTTATGAAAATAAAAGACAAAATCTAAACAGTCCAGAGCCACAGTGAGTCAGGTCAGCGAGAAAGTGGGCATCGTTTCATAATCCAATTTCATACACAAACAACGCCATTCGGTTTGCAGAAATTCATAGCCTTCCTAAGCTTTCAGACGTCATTGGGGAAAAATACAAAGTGGAGCTATGTTCCCTTCACAACATGCAGACTGACATTCTGAGCACATGTTTTCAGCTGCCTAGGCGCCATCGGTTAGGATATTAATGTTGACTGAAAAATCCTGTCCGACTCCTCCGTTTCAAAAAAAACATTATTCAATACGCTACTAGTCTACCCCTTCTGACTCTACGAACGAACTCTCATAACAGCAAGAGCCAATATTGGCCTGACCTGAAAATG

Function

NR:

description
PREDICTED: protein FAM69B

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU426081 False 1028 TUCP 0.45 1 18558140 18559167
TU426077 False 635 lncRNA 0.45 1 18558239 18558873
TU426078 False 596 lncRNA 0.45 1 18558239 18558834
TU426079 True 929 TUCP 0.43 1 18558239 18559167

Neighbor

gene id symbol gene type direction distance location
LOC110523369 LOC106568861 coding downstream 18670 18506309 ~ 18539569 (-)
enc1 LOC106568903 coding downstream 160901 18383114 ~ 18397338 (-)
ankra2 LOC106569021 coding downstream 498269 18052970 ~ 18059970 (-)
foxd1 LOC106569011 coding downstream 523598 18032820 ~ 18034641 (-)
LOC110523358 NA coding downstream 698642 17857501 ~ 17859597 (-)
LOC118964773 NA coding upstream 21396 18578378 ~ 18581454 (-)
LOC110523371 LOC106568849 coding upstream 28737 18587610 ~ 18589578 (-)
LOC110523372 LOC106568827 coding upstream 30781 18589654 ~ 18599366 (-)
LOC118964544 LOC106568982 coding upstream 183645 18742518 ~ 18743532 (-)
LOC110523374 LOC106568818 coding upstream 294544 18853417 ~ 18880188 (-)
G374710 NA non-coding downstream 52147 18505206 ~ 18506092 (-)
G374759 NA non-coding downstream 73841 18484098 ~ 18484398 (-)
G374758 NA non-coding downstream 77097 18480938 ~ 18481142 (-)
G374757 NA non-coding downstream 79120 18478884 ~ 18479119 (-)
G374740 NA non-coding downstream 101070 18456945 ~ 18457169 (-)
G374788 NA non-coding upstream 1650 18560523 ~ 18560808 (-)
G374790 NA non-coding upstream 3251 18562124 ~ 18562497 (-)
G374852 NA non-coding upstream 109020 18667893 ~ 18698250 (-)
G374925 NA non-coding upstream 201523 18760396 ~ 18760596 (-)
G374189 NA other downstream 555069 18002820 ~ 18003170 (-)
LOC110523354 LOC106569496 other downstream 1036752 17483696 ~ 17521507 (-)
G373228 LOC106569424 other downstream 1432432 17124037 ~ 17125807 (-)
LOC110523341 LOC106569324 other downstream 1616048 16909582 ~ 16942359 (-)
G372123 NA other downstream 2577024 15978502 ~ 15981215 (-)
G377800 NA other upstream 2135223 20694096 ~ 20694708 (-)
G377809 LOC106568602 other upstream 2145740 20704613 ~ 20705140 (-)
G377991 NA other upstream 2470585 21029458 ~ 21029783 (-)
G378359 NA other upstream 3232789 21791662 ~ 21791993 (-)
LOC110523434 LOC106567989 other upstream 3618392 22177265 ~ 22179322 (-)

Expression


Co-expression Network