G391497


Basic Information

Item Value
gene id G391497
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 33135243 ~ 33135607 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU444403
TGTGGAGTCGGGTAATGTCATTTGAAATgtctgaatggagagagggaaCCAAGTGTCCAAGTAACCATGTGAGGCACAATAATATCCGTCTTGCTAAGCAAATTTTCAACCATCCTGGTAACCTAGGAaacaagcctctctctctccacagtgttACATTTCAGAAAATTCATATTACCTAACACATTTACTGAACATAAAATACCTTATGGCACAGCTATTACTTTTATGCACATCACACTGGAAAACTGATCAAGCATAGTAGCCTAGCCTAGGTTCATTTAGACAAAATGCCATTGCAATTGGAATGTAGGCCTGCCAATAGCCTATCATATTTCTGCCCACATTAAACCCCACATGTTTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU444403 True 365 lncRNA 0.40 1 33135243 33135607

Neighbor

gene id symbol gene type direction distance location
LOC110523632 LOC106565566 coding upstream 171274 32909966 ~ 32963969 (+)
LOC110523631 LOC106565876 coding upstream 231480 32900863 ~ 32903763 (+)
LOC110522915 NA coding upstream 238433 32885656 ~ 32896810 (+)
LOC110523629 LOC107720969 coding upstream 251144 32762181 ~ 32884099 (+)
LOC110523627 LOC106565641 coding upstream 398690 32734905 ~ 32736553 (+)
tsc1b LOC106565454 coding downstream 90763 33226370 ~ 33259075 (+)
LOC110523644 LOC106565434 coding downstream 281811 33417418 ~ 33446506 (+)
LOC110523645 LOC106565424 coding downstream 354516 33490123 ~ 33492398 (+)
LOC100136128 LOC106565394 coding downstream 504881 33640488 ~ 33799714 (+)
LOC110523646 LOC106565369 coding downstream 695099 33830706 ~ 33844121 (+)
G391416 NA non-coding upstream 34417 33003985 ~ 33100826 (+)
G391450 NA non-coding upstream 71070 33063079 ~ 33064173 (+)
G391436 NA non-coding upstream 88818 33040578 ~ 33046425 (+)
G391435 LOC106565542 non-coding upstream 108905 33024322 ~ 33026338 (+)
G391401 LOC106565553 non-coding upstream 154228 32980162 ~ 32981015 (+)
G391525 NA non-coding downstream 57663 33193270 ~ 33199567 (+)
G391569 NA non-coding downstream 158085 33293692 ~ 33294263 (+)
G391772 NA non-coding downstream 202147 33337754 ~ 33338043 (+)
G391801 NA non-coding downstream 221236 33356843 ~ 33357184 (+)
G391818 NA non-coding downstream 250016 33385623 ~ 33385836 (+)
G390393 NA other upstream 914710 32220181 ~ 32220533 (+)
G390184 NA other upstream 1174498 31960355 ~ 31960745 (+)
G388019 NA other upstream 2847419 30286951 ~ 30287824 (+)
G387516 NA other upstream 3237109 29896986 ~ 29898134 (+)
tbx5a LOC106566939 other upstream 3389049 29741800 ~ 29763439 (+)
G391513 LOC100136561 other downstream 23219 33158826 ~ 33162980 (+)
G391805 NA other downstream 225350 33360957 ~ 33361341 (+)
G392776 NA other downstream 1011867 34147474 ~ 34150795 (+)
G394882 NA other downstream 2769505 35905112 ~ 35905781 (+)
G394910 NA other downstream 2831330 35966937 ~ 36004829 (+)

Expression


Co-expression Network