XLOC_023294 (CABZ01077956.1)


Basic Information

Item Value
gene id XLOC_023294
gene name CABZ01077956.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 8133726 ~ 8214253 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00046075
aaaataaacaaacaaacacatgttttgcTATTAAACTGCTTATCCATATGCTTATTATTTCCAGATCAGATCGGCACAAGTCGTCTTCTGTATGTTGTGGGACAGCCGAGAGAACACGTCTTGCCGTGCGTCTCCTTCCATCACTGCTAGGTTTGTCCTGCCGCCCACGACCTCGTCTGTCTCAGATTAGTCTGAGCCTTTTCCTCTTCAGTTTAATGTGGTTTCCCCGCTTGTACCTGCACTACTGTAGCCAGTGGATCTTCCTGCAGACTCAACAAATCCCCATCAACAGATTTTGGTTGGGAGCACACACAGTGGATCTAGTCTATCAGGGTTCGCTGTTGACTACCCTGGAGGAGGTTCTGGTGGTGCTGCTGGGCCCCCTGACCTTGAATGCAGCTACGCTACTGCTGCTCCTGATCAGATGGGGCTGTCAGCTAGTGTTTGGCTCACCGCCCTCTTTCCTGTCAAAGTTTATCATGGCTGCGGCAGCGTGGACAGTGCTGGACCCTCTGGCGGTCTTCGCTGTAGATGCCATCCTGGGGCGTTTGTTCTACAGTTCAGATGAACCATTAGCGGATGCTGCCAAGCTCTACTGGCATTTTTTTCGGACAGAGCAGTCGGGCACTGCAGGCATCATCATAACATTATTCCTCTACGCCGTCCACTGTATCCTGTCCTTCACCTTTCTTTATGTATACTTCCTCAGGCTGCACAATGATGGAAGATTGTTAGATATCTACCAACGCCTCCACGGCACTGAGAGAGAGTTCTTTGTGCCACACGATATGGAGGTCTCCAACCAGGAGCTCGATTACATTGTAAAGAAGGCAGAGCAATGGAGAGGCTTCAACGGAGAGAGACGTAAGGTGGCAGTGTATGACTACATCTGGACGGAGGAGGAGCCTGTGGAAGGACTGGCACCACCTACAGGCACACCCAATACCGGATGTGAGACCAGCACCCATGTATCCATCTACACACTGCATCTGAGCGGCCTGCGCCAACATTACAGACATTTCCTGAGACAACCGGATGGAGCCATTATACAAGTTATGGATGATTCTGACACTAATGCATTTCAAACATCAGAGGTGTATGAGCAACACGAGAGGATGAAGAGTGAGACACATCTTAGAGAGAGGAAGGGCAGAAAAGCTGGTTGGCGTTCATGCAGGGTTGAGCCTTTGGGAGGAAGTGACTCAAGCAGTGGAATTAAAGGGCAAAGAGATTTGGAGGTCGGTGGCCTCTAACCATTATTTGGAGCTTGGGCAGATCCTCAGCGGAGCTCCGATCAATCTTTTACCTGGGGAACGAGTGCTGCGTATTTCTATCACCATTCTATTGATTTTTCCATGTGCAGAGCCCTTATGTTAGAGAGAGAGGTGTTTTCATGTGGACACCACAGAGAAAACGCAGCCTGCAGCgcacacacattcatttatttatgcttgcaGACGCCCGTTGGCTCAGACGACTGCAAAATGCACACATCGGCATATTTAGCCGATTTTCTGATCTCACATGCACAAGTCCAAAAGGCCTAACATATGAGCAGAAACTTTTAAATTCAGAAAGTGAATGCCCTTTCTTTCATTCACTTCTTGTCCCACGGATTCACTTGTGCGTAGTGGTGATTTTCTGTTATATTCtctgttagtgtttttttttttttttactgtgatcaATAAAAGTGTAATGATCCAATATGGCCATGTTACAGCATGA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000104791

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00046075 True 1728 mRNA 0.48 8 8133726 8214253

Neighbor

gene id symbol gene type direction distance location
XLOC_023293 bloc1s5 coding downstream 137766 7988458 ~ 7995960 (-)
XLOC_023292 CR376854.1 coding downstream 166126 7967484 ~ 7967600 (-)
XLOC_023291 txndc5 coding downstream 176145 7941373 ~ 7957581 (-)
XLOC_023290 si:dkey-197c15.6 coding downstream 307237 7820042 ~ 7826489 (-)
XLOC_023289 rpgrip1 coding downstream 356337 7748751 ~ 7777389 (-)
XLOC_023295 eef1e1 coding upstream 29832 8244085 ~ 8261786 (-)
XLOC_023296 slc35b3 coding upstream 179037 8393290 ~ 8412526 (-)
XLOC_023297 tfap2a coding upstream 507423 8721676 ~ 8732519 (-)
XLOC_023298 mak coding upstream 528026 8742279 ~ 8777781 (-)
XLOC_023299 gcm2 coding upstream 613350 8827603 ~ 8831912 (-)
XLOC_023665 dre-mir-735 misc upstream 29963708 38177961 ~ 38178027 (-)
XLOC_023283 BX890551.1 non-coding downstream 1361349 6771308 ~ 6772377 (-)
XLOC_023272 NA non-coding downstream 2032606 6088272 ~ 6101120 (-)
XLOC_023265 NA non-coding downstream 2297012 5815995 ~ 5836714 (-)
XLOC_023264 NA non-coding downstream 2309600 5809520 ~ 5824126 (-)
XLOC_023303 CR318624.1 non-coding upstream 890360 9104613 ~ 9126025 (-)
XLOC_023304 NA non-coding upstream 1038481 9252734 ~ 9286642 (-)
XLOC_023305 NA non-coding upstream 1060842 9275095 ~ 9281017 (-)
XLOC_023307 NA non-coding upstream 1293421 9507674 ~ 9612356 (-)
XLOC_023309 BX649325.1 non-coding upstream 1498242 9712495 ~ 9712610 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000327_02106303_02137581 OFCC1 coding CI01000327 null 2105536 ~ 2137581 (-)