XLOC_023342 (cox19)


Basic Information

Item Value
gene id XLOC_023342
gene name cox19
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 12747377 ~ 12749116 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00046164
ACTAAAACGCTGACTACCAACCGCCGTTTCTTCGCCGCTGAAGAAAGTGTATTGAAGTGGTATCTTTTTCCAAATAATTAACAGAAAGACtgtattttataaaacaatgtCAACAGCGATGAACTTTGGAAGCAAGACGTTCCGACCGCGTCCACCGGACAAAGGAGCGTTTCCCTTGGATCACTTCGGTGAATGTAAATCATTCAAAGAGGTATATATGCAGTGCCTAAGAAACAATCATTTTGACAACTCGCGATGTCGGATAGAATCAAAGGAGTATCTGGAGTGCAGAATGGACAGACAGTTAATGACAAAGGAACCTCTTGAAAAACTTGGCTTTAATGATTTGACGGAGGATCTGTCAGAAGAAAATGAAGCCAGATCCTGACAAAGTGCTCTTTTAGTTTATCTGGCCATGTGATATGAATAGCGTGTAACGTTATACTATTAGCCAGAGCCCATGCTTGGTGCTCGGATTGATACTTTACATATTTGAAGTTGTTGTAGAATCCATTAAAAGGTAATTATTTGAAATCCAGTCTTCTTGGACAGTAATGTTATGAACAGAGTTGAACTTCAAAATaatgtctgtgtatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatataattatatatataaattaaaactttaaatttgAAATGATTTGTTATACATTTCATTTGGCTCTCATTTCATTGCAATCTCACCAAATAACTGATCTCACAAACCAGCTTAAATGTGCATATATCAGCAAACATTCTGTGAATTAGTTTCTGAGGAAGGTTTGTCTTCTAAAGTTGGTTAGATTtctaagaaaagaaaatggaATGTTCTCCTAATCTCTAGATTATTATCTCTTTACATTAGGGCTGCAATATATAGTTTTGGCATTAATATCGCAACAAGGCtttctgcaatagtcacatcgcaggatatgcaatgttgagttgtaATTATAGTCGATTAACAATTGACTATACATGAGATTTGCAGCGTATtaccataacagagtgaaactttatcatatgcatgtgttttaaaTGGCACTTCAAGAAAGTTTAAAGCAGTTGGCCACAATAAGAttaaacatttgtaactttaatgaagaaatatttactgatttaattatacaattaactatagtgttattttacattactaaatttaaattCGGTTTAACCCTGGAAAACCATAAAGAAcggtttatttacttttttccttTGCACGTAATTattcttgcttttattattttaatacatgatTCTTACAAATCATACCCTTGCAAAATCAACCCAAccaatctaaatgaatgatttttcacAAGTAGAGCTATTCATGCCATCTGGCAAAATAGTTTTTCATATCGCAATCtatattgcagcaaaacaaaatattgcaatatcagatttttctaatattgtgcagccctattgtaCACAAATAATCACTTCTACGTTGtttgttattaataaaaacaaatcacaaatttGCAATtgctgaatatataaataaaacagttgtccAACAAA

Function

symbol description
cox19 Predicted to be involved in mitochondrial cytochrome c oxidase assembly. Predicted to be active in mitochondrial intermembrane space. Orthologous to human COX19 (cytochrome c oxidase assembly factor COX19).

GO:

id name namespace
GO:0033617 mitochondrial cytochrome c oxidase assembly biological_process
GO:0005758 mitochondrial intermembrane space cellular_component
GO:0003674 molecular_function molecular_function

KEGG:

id description
ko04714 Thermogenesis
ko03029 Mitochondrial biogenesis

ZFIN:

id description
ZDB-GENE-070410-29 Predicted to be involved in mitochondrial cytochrome c oxidase assembly. Predicted to be active in mitochondrial intermembrane space. Orthologous to human COX19 (cytochrome c oxidase assembly factor COX19).

Ensembl:

ensembl_id ENSDARG00000063882

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00046164 True 1568 mRNA 0.31 3 12747377 12749116

Neighbor

gene id symbol gene type direction distance location
XLOC_023341 NA coding downstream 878 12741936 ~ 12746499 (-)
XLOC_023340 pdcd6 coding downstream 57806 12629649 ~ 12689571 (-)
XLOC_023339 NA coding downstream 145648 12596538 ~ 12601729 (-)
XLOC_023338 CR855257.1 coding downstream 590733 12155107 ~ 12156644 (-)
XLOC_023337 CU929203.2 coding downstream 617921 12128505 ~ 12129456 (-)
XLOC_023343 ipo4 coding upstream 4897 12754013 ~ 12832499 (-)
XLOC_023344 pck2 coding upstream 170903 12920019 ~ 12938922 (-)
XLOC_023345 CR405710.1 coding upstream 205373 12954489 ~ 12958668 (-)
XLOC_023346 dcaf11 coding upstream 214003 12963119 ~ 12983829 (-)
XLOC_023347 CR405710.2 coding upstream 221003 12970119 ~ 13002993 (-)
XLOC_023665 dre-mir-735 misc upstream 25428845 38177961 ~ 38178027 (-)
XLOC_023335 NA non-coding downstream 872165 11874337 ~ 11875212 (-)
XLOC_023348 NA non-coding upstream 309551 13058667 ~ 13125473 (-)
XLOC_023349 NA non-coding upstream 475132 13224248 ~ 13245885 (-)
XLOC_023352 NA non-coding upstream 606162 13355278 ~ 13357652 (-)
XLOC_023354 CR450741.1 non-coding upstream 860482 13609598 ~ 13609714 (-)
XLOC_023356 NA non-coding upstream 1692838 14441954 ~ 14445136 (-)

Expression


Co-expression Network