Gene
RNA
| Item | Value |
|---|---|
| gene id | G422468 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 60280128 ~ 60280446 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| TC1-like transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU478715 | True | 319 | lncRNA | 0.43 | 1 | 60280128 | 60280446 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524206 | ap1m1 | coding | downstream | 145856 | 60116530 ~ 60134272 (-) |
| klf2a | LOC106613686 | coding | downstream | 298509 | 59979007 ~ 59981619 (-) |
| LOC118964630 | NA | coding | downstream | 365852 | 59904845 ~ 59914276 (-) |
| LOC110524194 | LOC106613679 | coding | downstream | 478924 | 59787744 ~ 59801204 (-) |
| LOC110524193 | LOC106613676 | coding | downstream | 503472 | 59772761 ~ 59776656 (-) |
| LOC110524209 | LOC106613694 | coding | upstream | 1928 | 60282374 ~ 60289431 (-) |
| lpl | lpl | coding | upstream | 17758 | 60298204 ~ 60306640 (-) |
| LOC110524214 | LOC106613699 | coding | upstream | 114578 | 60395024 ~ 60398862 (-) |
| LOC118964632 | NA | coding | upstream | 133717 | 60414163 ~ 60426534 (-) |
| ccl44 | LOC106613702 | coding | upstream | 179401 | 60459847 ~ 60462194 (-) |
| G422466 | NA | non-coding | downstream | 987 | 60278932 ~ 60279141 (-) |
| G422418 | NA | non-coding | downstream | 59914 | 60219892 ~ 60220214 (-) |
| G422415 | NA | non-coding | downstream | 62464 | 60217371 ~ 60217664 (-) |
| G422388 | NA | non-coding | downstream | 97268 | 60182624 ~ 60182860 (-) |
| G422365 | NA | non-coding | downstream | 97741 | 60180660 ~ 60182387 (-) |
| G422471 | NA | non-coding | upstream | 13056 | 60293502 ~ 60293708 (-) |
| G422474 | NA | non-coding | upstream | 15728 | 60296174 ~ 60296487 (-) |
| G422481 | NA | non-coding | upstream | 28383 | 60308829 ~ 60310071 (-) |
| G423073 | NA | non-coding | upstream | 80144 | 60360590 ~ 60362946 (-) |
| G423057 | tpm4 | non-coding | upstream | 87983 | 60368429 ~ 60393194 (-) |
| G422347 | NA | other | downstream | 179072 | 60100765 ~ 60101056 (-) |
| lsg1 | lsg1 | other | downstream | 1141871 | 59131152 ~ 59138429 (-) |
| G420982 | LOC106613655 | other | downstream | 1243829 | 59026103 ~ 59036299 (-) |
| G420421 | NA | other | downstream | 1865985 | 58413128 ~ 58414143 (-) |
| G420193 | NA | other | downstream | 2166068 | 58112387 ~ 58114060 (-) |
| LOC110524239 | LOC106573579 | other | upstream | 778548 | 61058949 ~ 61081864 (-) |
| G424474 | NA | other | upstream | 1336424 | 61616870 ~ 61617244 (-) |
| G424499 | LOC106613729 | other | upstream | 1369521 | 61649967 ~ 61651775 (-) |
| G424502 | NA | other | upstream | 1378587 | 61659033 ~ 61659585 (-) |
| G424649 | NA | other | upstream | 1607752 | 61888198 ~ 61927422 (-) |
