LOC110525433 (ccng2)


Basic Information

Item Value
gene id LOC110525433
gene name ccng2
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 20584162 ~ 20591588 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110525433
TTTCCCGAGtacccagttgttttgaatgcagcaTATGACGCAAACCCTATCCATCTTTAGCCTACAACGTGTCGTCATCCACTGGTGCTGATGGATGTTGTAGTCTCGCAGTTTGTTGAGACAACGACCGTTCGATCCTACCGCATTTCAGATGGAAATTATCAACACCAACATCAGATGACAATTTAGGAACTATCTTGTTAATTTACGTTGTAGCTAACTAATCGATTACACTTTGTTGTAAACGAAATGGAAATTTGAATACTGAGTTGCTATATTTTCATAAAATCGTATTGTTTCAAGCGTTTGGCAAAGATGCGGGATCTTCAATACCTTGACAATGAAACATGTTGGCTTGTCAAAGAGCTGAAGTCAAACATTTCTCAAGAATCATACTTTTTACCTAGGGAAACTGGCCTGAATATAATGGAGTCTGCAGCAGAGAATCACAATGGAGTCTCTGCAAAATGCAGAAATGCCAAAGTTGAAGACTTGTGGAGCCTGACCAGTTTCTTTGGTTTCAGCACCCAGACATTTGTTCTGGCTGTCAATCTACTGGATAGGTTCTTAGCCATTATGAAGGTCCAACCTAAGCATCTGCCTTGCATTGGAGTCTCCTGCCTCCATATTGCTGCCAAAATGGTTGAGGATGAGTGTAACATCTCACCCACCCATGAACTCATCCGCATCAGCCAAAGCAAGTTCACTGTTTCTGACCTCAGCCGCATGGAGAAGATAATCTCTGGAAAACTCAATTTGGAGCTCAAAGCCGTCACAGCCTTAACCTTTTTACACTTATACCATGCTGTCATCGTATCACTTACATCAGAAAGGTGAGTGCTTTGTTTCTTAATTGATAACTTTTTGCATTATGTCATCAGTGAGTATTTTTCCAATTGCTGTTTCTTATTTCTTTCACAGATTGTTGACAGTGAGTTACTCTACTGGAGGGGACTTGTGGCCAAATGCATGACTGAGTACCGCTCAAGTGAATGTAACAAACCAGACAACAAAAAACTGTTGTGGATCGTGTCCAGACGAACTGCCCAAAATTTGCACGCTAATAACTTCAGTGTCCCTGAACTGCCGACCATTCCAGAGGGGAGCTGGGGTGAAAGTGAGAGTGAGGATTCCTGTGAGGACATGAGCTGTGAAGAGGACAGCCCGTGCAGCTCTCCTGGCAGCGACGAAAAGGGAGCCTTCTTCCCCGTAGAGTTTCGCAACCAGGGCAGAAAATGATACTCCCTCTTTTTTGATGAGCTCAAACTTGTGATTGAGATTATGTGTAACCAGGGTGCTAAATGTAACTTTCCCTAAATGTACTGTTTCCCCTTCCTTGTAGTCATGGTTCAGGACAAAATAGTTTATTTCACttggcatactgtatgtgtgacaGACTGGTATCAAACTCGGGTTGCCTGCGAGCCTGGATAGCCCTCTCCACTAAAGCCTCGGTGTGGACATAAGTCTTCCTGTCTAAAGCTAGGTTACTGATCACGGGAGCGTAGTCCAACAAACCACCTCTGCTACATACTGGAAATAGTGAACAACAGGCCCTATCAAGTGCCTGTGTTAGTCCATGTACTGTTTTTAAACTTTTGTTATGATTTTAGATCTGAGTGAGATTTAAATTGCAATATCTTGGCAGCTGACTGGCAATAAGATCTTTGAAAGCCTTTTTAAAGATGTTGCTGGTGTCAATCTATGTCCAAATGTGACACATTCCAGGTGACATTAAGCACAATGGTGTAATGACTTTCTTCCTAGGATGTCAAACCTGTGCACTGACTGTTTAAATCAATGGGAAATACCCAACATATTGGTACATTTGTGCAAAACTTGTTTTATAGAATAATATTCATGTAAAAGTGTCCTATACACCATGTTATTGTAATGTGTTTGTAAGATTATATGCAGGATGATACTGTATTCTATGAATGGTGActtgtatgtaaatgtgattgtgTTAGAGAATGATGGTGATTGTTGTCTATTGAGATTCAGTACATGTgcaaaatatttatatttaaacAAATAACAATGTACATAAAATTAAGAAAGTTGTATCATGCTTTGTGAATAGGCCAtcttatgttactgtatatcaaCATATTGTTAGAAATGAACCAATAACCCTAAAAAAAAGAG
>TU550343
cttcttgatatgccataactgtcagatggatggattatcttggcaaaagataaatgctcactaacagggatgcaaacaaatttgtgcaccaaatctgagtgaaataagctttttgtgagtatggaaaactatttcagctcctgaaacatgggactttatatgttgcgtttatatttttgttcagtatataatagAATTTAGCAGAAGTAGCCCATTTATGCTGACTTATGTATCACTATAATGGTATGTTCACAGGTCCAACCTAAGCATCTGCCTTGCATTGGAGTCTCCTGCCTCCATATTGCTGCCAAAATGGTTGAGGATGAGTGTAACATCTCACCCACCCATGAACTCATCCGCATCAGCCAAAGCAAGTTCACTGTTTCTGACCTCAGCCGCATGGAGAAGATAATCTCTGGAAAACTCAATTTGGAGCTCAAAGCCGTCACAGCCTTAACCTTTTTACACTTATACCATGCTGTCATCGTATCACTTACATCAGAAAGATTGTTGACAGTGAGTTACTCTACTGGAGGGGACTTGTGGCCAAATGCATGACTGAGTACCGCTCAAGTGAATGTAACAAACCAGACAACAAAAAACTGTTGTGGATCGTGTCCAGACGAACTGCCCAAAATTTGCACGCTAATAACTTCAGTGTCCCTGAACTGCCGACCATTCCAGAGGGGAGCTGGGGTGAAAGTGAGAGTGAGGATTCCTGTGAGGACATGAGCTGTGAAGAGGACAGCCCGTGCAGCTCTCCTGGCAGCGACGAAAAGGGAGCCTTCTTCCCCGTAGAGTTTCGCAACCAGGGCAGAAAATGATACTCCCTCTTTTTTGATGAGCTCAAACTTGTGATTGAGATTATGTGTAACCAGGGTGCTAAATGTAACTTTCCCTAAATGTACTGTTTCCCCTTCCTTGTAGTCATGGTTCAGGACAAAATAGTTTATTTCACttggcatactgtatgtgtgacaGACTGGTATCAAACTCGGGTTGCCTGCGAGCCTGGATAGCCCTCTCCACTAAAGCCTCGGTGTGGACATAAGTCTTCCTGTCTAAAGCTAGGTTACTGATCACGGGAGCGTAGTCCAACAAACCACCTCTGCTACATACTGGAAATAGTGAACAACAGGCCCTATCAAGTGCCTGTGTTAGTCCATGTACTGTTTTTAAACTTTTGTTATGATTTTAGATCTGAGTGAGATTTAAATTGCAATATCTTGGCAGCTGACTGGCAATAAGATCTTTGAAAGCCTTTTTAAAGATGTTGCTGGTGTCAATCTATGTCCAAATGTGACACATTCCAGGTGACATTAAGCACAATGGTGTAATGACTTTCTTCCTAGGATGTCAAACCTGTGCACTGACTGTTTAAATCAATGGGAAATACCCAACATATTGGTACATTTGTGCAAAACTTGTTTTATAGAATAATATTCATGTAAAAGTGTCCTATACACCATGTTATTGTAATGTGTTTGTAAGATTATATGCAGGATGATACTGTATTCTATGAATGGTGActtgtatgtaaatgtgattgtgTTAGAGAATGATGGTGATTGTTGTCTATTGAGATTCAGTACATGTgcaaaatatttatatttaaacAAATAACAATGTACATAAAATTAAGAAAGTTGTATCATGCTTTGTGAATAGGCCAtc
>TU550345
TGTTTCTTATTTCTTTCACAGATTGTTGACAGTGAGTTACTCTACTGGAGGGGACTTGTGGCCAAATGCATGACTGAGTACCGCTCAAGTGAATGTAACAAACCAGACAACAAAAAACTGTTGTGGATCGTGTCCAGACGAACTGCCCAAAATTTGCACGCTAATAACTTCAGTGTCCCTGAACTGCCGACCATTCCAGAGGGGAGCTGGGGTGAAAGTGAGAGTGAGGATTCCTGTGAGGACATGAGCTGTGAAGAGGACAGCCCGTGCAGCTCTCCTGGCAGCGACGAAAAGGGAGCCTTCTTCCCCGTAGAGTTTCGCAACCAGGGCAGAAAATGATACTCCCTCTTTTTTGATGAGCTCAAACTTGTGATTGAGATTATGTGTAACCAGGGTGCTAAATGTAACTTTCCCTAAATGTACTGTTTCCCCTTCCTTGTAGTCATGGTTCAGGACAAAATAGTTTATTTCACttggcatactgtatgtgtgacaGACTGGTATCAAACTCGGGTTGCCTGCGAGCCTGGATAGCCCTCTCCACTAAAGCCTCGGTGTGGACATAAGTCTTCCTGTCTAAAGCTAGGTTACTGATCACGGGAGCGTAGTCCAACAAACCACCTCTGCTACATACTGGAAATAGTGAACAACAGGCCCTATCAAGTGCCTGTGTTAGTCCATGTACTGTTTTTAAACTTTTGTTATGATTTTAGATCTGAGTGAGATTTAAATTGCAATATCTTGGCAGCTGACTGGCAATAAGATCTTTGAAAGCCTTTTTAAAGATGTTGCTGGTGTCAATCTATGTCCAAATGTGACACATTCCAGGTGACATTAAGCACAATGGTGTAATGACTTTCTTCCTAGGATGTCAAACCTGTGCACTGACTGTTTAAATCAATGGGAAATACCCAACATATTGGTACATTTGTGCAAAACTTGTTTTATAGAATAATATTCATGTAAAAGTGTCCTATACACCATGTTATTGTAATGTGTTTGTAAGATTATATGCAGGATGATACTGTATTCTATGAATGGTGActtgtatgtaaatgtgattgtgTTAGAGAATGATGGTGATTGTTGTCTATTGAGATTCAGTACATGTgcaaaatatttatatttaaacAAATAACAATGTACATAAAATTAAGAAAGTTGTATCATGCTTTGTGAATAGGCCAtc
>TU550346
TTCATGTGAATAATTGCGTCAGAAATCATTTTCCACATACGGCTACAAATATGAGCTTAATAGCTAACTAACCTACGTGACCCATATCGATTTCTCACGTAGATAACTTAAAACACCTCCCTTCAAGTAAAGCATTAGAATAGACTGGTTGCTTTTCAACAAGGTTCCGTCCATCCATTCTACTATCGAATATTTTCCTGGACACTTTATATAAGAAGATGCGGGATCTTCAATACCTTGACAATGAAACATGTTGGCTTGTCAAAGAGCTGAAGTCAAACATTTCTCAAGAATCATACTTTTTACCTAGGGAAACTGGCCTGAATATAATGGAGTCTGCAGCAGAGAATCACAATGGAGTCTCTGCAAAATGCAGAAATGCCAAAGTTGAAGACTTGTGGAGCCTGACCAGTTTCTTTGGTTTCAGCACCCAGACATTTGTTCTGGCTGTCAATCTACTGGATAGGTTCTTAGCCATTATGAAGtaccgggggaccttcagacgagtcttgtgaggcctttgggtgtcatagagcaaaacatgtatgagagtctcacctttccacagaggggtcatattagtgtgtagcccaaactgtttggacgctacagacagaagttggcagatcggctgtaccgacttcagacgtgTCCCAAGACAGTGGTGGGAGTCGCCAAACCGCTTGGacgctacagacgattttgtgagatgacggattttcgggatgtctcatggtctaacaaacactgctctagcccTGTCACTTTTCACCGAGGTGGAAGTGCGACATCggtggatgcggtggattgagacgcatccaatgcaaaaaaccatatctatatctctatcttaaactgacagatttttattgggaattttgtattatgctaattaatATTTCAGTGGGGGCGCGGACATCGACTTAAAGATATGCTTGTTGTGTTGAGATATGGTAATTCTGGATATTCTACGGAATTAGCgttttgtatgcattttgtttattgtttaatACCTGTATTTGTTGTTTAACTTATGTCAATTTGCGTGCACTTTACTTTGTTTaattttactgaacaaaaatataaacgcaatatgcaacaatttcaaatattttactgagttacggaaagcagtcaattaaaataaataaattaggcaacttatttgcgaaagtattcggcccccttgaactttgcaaccttttgccacatttcaggcttcaaacataaagac

Function

symbol description
ccng2 Predicted to enable cyclin-dependent protein serine/threonine kinase regulator activity. Predicted to be involved in mitotic cell cycle phase transition and regulation of cyclin-dependent protein serine/threonine kinase activity. Predicted to act upstream of or within regulation of cell cycle. Predicted to be part of cyclin-dependent protein kinase holoenzyme complex. Predicted to be active in cytoplasm and nucleus. Is expressed in endocrine system; nervous system; neural tube; pronephric duct; and somite. Orthologous to human CCNG2 (cyclin G2).

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110525433 False 2148 mRNA 0.40 5 20584162 20591588
TU550343 False 1674 lncRNA 0.40 3 20584221 20586220
TU550345 False 1189 TUCP 0.40 2 20584221 20585647
TU550346 True 1234 lncRNA 0.40 4 20589234 20591127

Neighbor

gene id symbol gene type direction distance location
LOC110525430 LOC106585377 coding downstream 1157 20566415 ~ 20583005 (-)
zgc:152968 LOC106585374 coding downstream 32856 20537756 ~ 20551306 (-)
LOC110525421 LOC106585369 coding downstream 119875 20452244 ~ 20464287 (-)
LOC110525419 LOC106585366 coding downstream 452432 20076288 ~ 20131730 (-)
LOC118964851 NA coding downstream 483166 20097049 ~ 20101296 (-)
zgc:158260 LOC106585379 coding upstream 11485 20603073 ~ 20612601 (-)
LOC110525114 LOC106585382 coding upstream 64907 20656495 ~ 20670677 (-)
LOC110525438 LOC106585383 coding upstream 96556 20688144 ~ 20699512 (-)
LOC110525435 LOC106585385 coding upstream 122116 20713704 ~ 20726970 (-)
hint2 hint2 coding upstream 136411 20727999 ~ 20730282 (-)
G484136 NA non-coding downstream 67927 20476734 ~ 20516235 (-)
G484137 yee9 non-coding downstream 104952 20477867 ~ 20479210 (-)
G484179 NA non-coding downstream 138321 20444161 ~ 20445841 (-)
G484180 NA non-coding downstream 140221 20443511 ~ 20443941 (-)
G483953 LOC106585366 non-coding downstream 238636 20342041 ~ 20345526 (-)
G484249 NA non-coding upstream 33087 20624675 ~ 20631356 (-)
G484262 NA non-coding upstream 49602 20641190 ~ 20645048 (-)
G484400 NA non-coding upstream 388808 20980396 ~ 20980643 (-)
G484410 NA non-coding upstream 412457 21004045 ~ 21004375 (-)
G484411 NA non-coding upstream 412895 21004483 ~ 21004764 (-)
G484175 NA other downstream 144478 20439307 ~ 20439684 (-)
G483875 NA other downstream 648436 19933244 ~ 19935726 (-)
G483145 NA other downstream 863546 19710075 ~ 19720616 (-)
G482907 LOC106585357 other downstream 1010735 19569207 ~ 19573427 (-)
G482658 NA other downstream 1273169 19310423 ~ 19310993 (-)
G484409 NA other upstream 415428 21007016 ~ 21009082 (-)
LOC110525458 LOC106585411 other upstream 528388 21115008 ~ 21121728 (-)
G484807 LOC106585304 other upstream 704992 21296580 ~ 21298173 (-)
G484895 LOC106585423 other upstream 840342 21431930 ~ 21434719 (-)
G485279 NA other upstream 1241960 21833548 ~ 21834360 (-)
G484232 NA other upstream 2615 20588262 ~ 20608736 (-)

Expression


Co-expression Network