LOC110525798 (LOC106585045)


Basic Information

Item Value
gene id LOC110525798
gene name LOC106585045
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 33099066 ~ 33103756 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021606229.2
ctcccctcttcctcctccacattGCCCCTTATGCAACAGTGTTTTTGTCTAAGCCTCCGGGAGGCATATGCCCCAGCAGTAGAGGTGTTCTGCTCTATCTGTACTGTACGATCGTCCTCAGTGtctctgctccatctctctctacctctctctatggCTGTTCAGCTGGTTGTAGCTCTCCTGGCACTAGCCTCTCTGAGTGCTGCATCTGCACCGGACTGTAAAGAACTGGTCAAACCCCTGGTACTGGAGGACCATACCGAGctctatggcAAATGGGTGTATGTGATGGGGTCTGCGGATCATTTATTCTTCCAAAATGCTTTGGGGACTCTGAAAAGCTCCTGGATAGACCTGTCGGCTACATCGGACCATAAAGTAGTCACCCTAAGATGGGGAGACCGCATTGATGGAAAATGCATCGTGGGTACAACACATGCTACCATCTCCGGCACCACTTCCACAGTACACATTCATTTGTCTGAACACAAAGGCCAGTACCTGGAGACCTGCCCTGACTGCCTGCTTTGGTCAGACACATCTCGTAATGGAGATGTCACTGGCAGATACCTGCTCCTGTTCAcaAGGACAGGGAAAATGGATCACACATACCTGGACACCTATAAGaaacaggcagagtgtctgaaCTTCCCAGAGAAACACCAGACCTACGATGGAAAAACAGAGCTGTGCCCTGATgacaaggaggagaagaaggtggtggaggagaaggtggtggtggaggaggagattaTGGAGGAGATTATGGAGGAGAAGCAGCCTACGGAGGAGGAGAAGGCTACGGAGGAGAAGGCTACGGAGGAGGAGAAGGCTACGGAGGAGGAGAAGGCTACGGAGGAGGAGAAGGCTACGGAGGAGGAGAAGGCTACAGCGGAGGAGAAGGCTACAGCGGAGGAGAAGgctacagaggaggagaaggctacagaggaggagaaggctacagaggaggagaaggctacagaggaggagaaggctacagaggaggagaaggctaCAGCGGAGGAGAAGACAACAAAGTGAATAAGAGAACCAGATCCTCACCGTGTTGCCCAACAAAACCTCCCTTTAGTGGAACTTTGATCCCATAACCACTAACCAAATACCACTTGTACTTCCATGCACTTCAAACCATGTCTTACATACTCATGACACATTCTAGGTGCTGTATTGTTAAAAAATGCTAAAGTTTTTACCATGAACTGTGTctttttgctgtttatttgataACAGTTCAAGGTATCTTAAATAACAAAATATGACTGTTCAAACAAAGACATTTAAATAAACACATTCAACCTTGTAA

Function

NR:

description
uncharacterized protein LOC110525798 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021606229.2 True 1324 mRNA 0.49 6 33099066 33103756

Neighbor

gene id symbol gene type direction distance location
LOC110525797 LOC106585042 coding downstream 22960 33073701 ~ 33076106 (-)
LOC110525792 LOC106585039 coding downstream 136852 32947034 ~ 32962214 (-)
LOC110525788 LOC106585037 coding downstream 174656 32883925 ~ 32924410 (-)
LOC110525787 LOC106585035 coding downstream 339115 32750665 ~ 32759951 (-)
LOC110525785 LOC106585030 coding downstream 368390 32690707 ~ 32730676 (-)
LOC110525800 ergi2 coding upstream 10940 33114696 ~ 33130672 (-)
LOC118965074 NA coding upstream 89514 33193270 ~ 33197445 (-)
LOC118965075 NA coding upstream 94410 33198166 ~ 33199518 (-)
LOC110525802 LOC106585047 coding upstream 97661 33201417 ~ 33211246 (-)
LOC118964861 NA coding upstream 101563 33205319 ~ 33206241 (-)
G498334 NA non-coding downstream 76025 33014886 ~ 33023041 (-)
G498324 NA non-coding downstream 93430 33005435 ~ 33005636 (-)
G497708 NA non-coding downstream 154319 32944201 ~ 32944747 (-)
G497707 NA non-coding downstream 156572 32942214 ~ 32942494 (-)
G497704 NA non-coding downstream 160752 32937884 ~ 32938314 (-)
G498447 NA non-coding upstream 85366 33189122 ~ 33189398 (-)
G498452 NA non-coding upstream 105340 33209096 ~ 33209696 (-)
G498489 NA non-coding upstream 157621 33261377 ~ 33331621 (-)
G498493 NA non-coding upstream 162777 33266533 ~ 33266855 (-)
G498500 LOC106585050 non-coding upstream 175471 33279227 ~ 33280931 (-)
LOC110525784 LOC106585031 other downstream 416219 32680037 ~ 32682899 (-)
G496851 NA other downstream 1206417 31843463 ~ 31892649 (-)
G496777 NA other downstream 1427139 31670978 ~ 31671927 (-)
G496772 NA other downstream 1437448 31661393 ~ 31661618 (-)
G495560 NA other downstream 2523493 30575118 ~ 30575573 (-)
G498484 rpl6 other upstream 223751 33327507 ~ 33330504 (-)
LOC110525812 LOC103397138 other upstream 228894 33332650 ~ 33336818 (-)
G498960 NA other upstream 936603 34040359 ~ 34041174 (-)
G501142 NA other upstream 2661610 35765366 ~ 35767929 (-)
hk2 LOC106585103 other upstream 3404300 36507843 ~ 36569143 (-)

Expression


Co-expression Network